JASPAR - BHLHE40 - BP000976.1

This page shows detailed deep learning-derived predictions and motifs for BHLHE40 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	BHLHE40
Model ID:	BP000976.1
Cell line/tissue:	GM12878
Class:	Basic helix-loop-helix factors (bHLH)
Family:	Hairy-related factors
JASPAR ID:	MA0464.3
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	O14503
Source:	ENCSR987MTA
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 17718

Contribution weight matrix (CWM)

A [	-0.00	-0.00	0.00	-0.00	0.00	-0.00	0.06	0.00	0.00	-0.00	-0.00	0.01	-0.00	-0.00	-0.00	]
C [	0.00	0.00	0.00	0.00	-0.00	0.09	-0.00	0.09	0.00	0.00	0.00	0.01	0.01	0.00	0.00	]
G [	0.00	0.00	0.00	0.01	0.02	0.00	0.00	0.00	0.09	-0.00	0.07	-0.00	0.00	0.00	0.00	]
T [	-0.00	-0.00	-0.00	-0.00	0.01	-0.00	-0.00	0.00	0.00	0.03	0.00	0.00	-0.00	0.00	-0.00	]

Frequency matrix

A [	3760	4021	3824	4038	4248	4371	4389	4596	3574	3369	4659	3480	3547	3327	3959	3469	3464	3762	3513	3295	3787	3222	4294	2881	718	16	17574	7	180	1579	239	5130	2107	3410	3301	3118	4498	3641	3268	3098	3456	3373	4283	3162	3617	3433	4756	3832	3479	3438	]
C [	5318	5194	5028	5341	5048	4895	4644	4788	4548	5041	4632	4779	5603	5326	4578	4900	5025	5489	4961	4989	4830	5449	4686	4092	243	17684	34	17637	23	2938	398	5193	7847	5039	5224	5081	4648	5025	4848	5834	5770	5792	4720	5147	5908	4758	4573	5465	4710	5382	]
G [	4812	4811	4813	4731	4991	4647	5288	4700	5324	4718	4951	5828	5319	4919	5780	5808	6041	4812	5751	4760	6011	5376	5097	7307	11104	14	61	22	17505	1818	14270	3083	4539	4302	5830	4910	5416	5215	5338	5073	4885	4690	5286	5619	4812	4760	5000	4761	4840	4774	]
T [	3828	3692	4053	3608	3431	3805	3397	3634	4272	4590	3476	3631	3249	4146	3401	3541	3188	3655	3493	4674	3090	3671	3641	3438	5653	4	49	52	10	11383	2811	4312	3225	4967	3363	4609	3156	3837	4264	3713	3607	3863	3429	3790	3381	4767	3389	3660	4689	4124	]

Hypothetical CWM

A [	-0.00	0.00	0.00	-0.00	-0.00	0.00	0.06	-0.06	0.01	-0.01	-0.04	0.02	-0.01	0.00	-0.00	-0.00	]
C [	0.01	0.01	0.01	0.02	-0.03	0.09	-0.03	0.09	-0.02	0.02	-0.04	0.03	0.02	0.01	0.01	0.01	]
G [	0.01	0.01	0.01	0.02	0.04	-0.05	0.01	-0.02	0.09	-0.03	0.08	-0.02	0.01	0.01	0.01	0.01	]
T [	0.00	-0.00	0.00	-0.01	0.03	-0.04	-0.01	0.01	-0.06	0.04	0.01	0.00	-0.00	0.00	0.00	-0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 4272

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2973

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1567

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1500

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 601

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 517

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 414

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 404

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 148

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 144

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 87

CWM

PFM

HCWM

6 profiles found for the same TF (BHLHE40) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000970.1	BHLHE40	ENCSR000BID	HepG2	Homo sapiens	MA0464.3
BP000971.1	BHLHE40	ENCSR000DYJ	A549	Homo sapiens	MA0464.3
BP000972.1	BHLHE40	ENCSR000DZJ	GM12878	Homo sapiens	MA0464.3
BP000973.1	BHLHE40	ENCSR000EDT	HepG2	Homo sapiens	MA0464.3
BP000974.1	BHLHE40	ENCSR000EGV	K562	Homo sapiens	MA0464.3
BP000975.1	BHLHE40	ENCSR957KYB	IMR-90	Homo sapiens	MA0464.3