JASPAR - BHLHE40 - BP000974.1

This page shows detailed deep learning-derived predictions and motifs for BHLHE40 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	BHLHE40
Model ID:	BP000974.1
Cell line/tissue:	K562
Class:	Basic helix-loop-helix factors (bHLH)
Family:	Hairy-related factors
JASPAR ID:	MA0464.3
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	O14503
Source:	ENCSR000EGV
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 12008

Contribution weight matrix (CWM)

A [	-0.00	-0.00	-0.00	-0.00	0.00	0.04	0.00	-0.00	-0.00	-0.00	0.01	-0.00	-0.00	-0.00	-0.00	]
C [	0.00	0.00	0.00	-0.01	0.08	-0.00	0.11	-0.00	0.00	0.00	0.03	0.01	0.00	0.00	0.00	]
G [	0.00	0.00	0.01	0.01	-0.00	0.00	-0.00	0.11	-0.00	0.09	-0.00	0.00	0.00	0.00	0.00	]
T [	-0.00	-0.00	-0.00	0.01	-0.00	-0.00	-0.00	-0.00	0.06	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	]

Frequency matrix

A [	2669	2795	2616	2349	2828	2418	2542	2397	2574	2460	2503	2634	2496	2207	2850	2376	3105	2060	2426	1518	8690	0	28	61	9	4034	2425	1953	2517	2247	2606	2398	2431	2245	2437	2432	2736	2217	2480	2523	2696	2569	2534	2447	2629	2416	2543	2573	2509	2477	]
C [	3321	3460	3305	3528	3412	3428	3648	3677	3474	3500	3563	3665	3696	3623	3628	3823	2852	3045	2279	10288	1116	11982	4	112	22	7322	4594	3541	3577	3801	3343	3662	3313	3663	3486	3616	3379	3714	3748	3467	3316	3527	3381	3591	3300	3465	3382	3374	3271	3354	]
G [	3692	3291	3660	3247	3321	3649	3640	3319	3580	3676	3637	3433	3402	3464	3342	3351	3822	5456	2945	129	1330	3	11975	67	11921	225	2659	3563	3760	3460	3876	3718	3710	3764	3689	3473	3640	3636	3428	3274	3595	3297	3359	3350	3410	3475	3601	3427	3554	3559	]
T [	2326	2462	2427	2884	2447	2513	2178	2615	2380	2372	2305	2276	2414	2714	2188	2458	2229	1447	4358	73	872	23	1	11768	56	427	2330	2951	2154	2500	2183	2230	2554	2336	2396	2487	2253	2441	2352	2744	2401	2615	2734	2620	2669	2652	2482	2634	2674	2618	]

Hypothetical CWM

A [	-0.00	-0.00	0.00	-0.00	-0.00	0.01	0.05	-0.07	0.00	-0.02	-0.04	0.03	-0.01	-0.00	-0.00	-0.00	]
C [	0.01	0.01	0.01	0.02	-0.03	0.09	-0.03	0.11	-0.05	0.02	-0.05	0.05	0.02	0.01	0.01	0.01	]
G [	0.01	0.01	0.01	0.02	0.04	-0.05	0.03	-0.05	0.11	-0.03	0.09	-0.04	0.02	0.01	0.01	0.01	]
T [	-0.00	-0.00	-0.00	-0.02	0.03	-0.04	-0.01	0.01	-0.07	0.06	0.00	-0.01	-0.01	0.00	-0.00	-0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 5475

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3022

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1860

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1115

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 39

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 30

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 20

CWM

PFM

HCWM

6 profiles found for the same TF (BHLHE40) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000970.1	BHLHE40	ENCSR000BID	HepG2	Homo sapiens	MA0464.3
BP000971.1	BHLHE40	ENCSR000DYJ	A549	Homo sapiens	MA0464.3
BP000972.1	BHLHE40	ENCSR000DZJ	GM12878	Homo sapiens	MA0464.3
BP000973.1	BHLHE40	ENCSR000EDT	HepG2	Homo sapiens	MA0464.3
BP000975.1	BHLHE40	ENCSR957KYB	IMR-90	Homo sapiens	MA0464.3
BP000976.1	BHLHE40	ENCSR987MTA	GM12878	Homo sapiens	MA0464.3