JASPAR - BHLHE40 - BP000972.1

This page shows detailed deep learning-derived predictions and motifs for BHLHE40 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	BHLHE40
Model ID:	BP000972.1
Cell line/tissue:	GM12878
Class:	Basic helix-loop-helix factors (bHLH)
Family:	Hairy-related factors
JASPAR ID:	MA0464.3
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	O14503
Source:	ENCSR000DZJ
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 9253

Contribution weight matrix (CWM)

A [	-0.00	-0.00	0.00	-0.00	-0.00	-0.00	0.06	0.00	0.00	-0.00	-0.00	0.01	-0.00	-0.00	-0.00	]
C [	0.00	0.00	0.00	0.00	-0.00	0.09	-0.00	0.10	0.00	0.00	0.00	0.00	0.01	0.00	0.00	]
G [	0.00	0.00	0.00	0.01	0.02	0.00	0.00	-0.00	0.10	-0.00	0.07	-0.00	0.00	0.00	0.00	]
T [	0.00	-0.00	-0.00	-0.00	0.01	0.00	-0.00	0.00	0.00	0.03	0.00	0.00	-0.00	0.00	-0.00	]

Frequency matrix

A [	2017	2052	1932	2060	2111	2047	2130	1973	1914	2168	1964	1948	1832	1976	1971	1905	1891	1854	1805	1968	1787	2341	1660	419	20	9195	2	46	832	65	3076	1139	1705	1836	1734	1972	1814	1854	1698	1938	1863	1942	1768	1989	1871	2086	1951	1942	1890	1917	]
C [	2624	2502	2760	2645	2570	2518	2630	2495	2697	2525	2592	2594	2613	2581	2609	2760	2842	2660	2765	2649	2911	2564	2249	214	9222	13	9201	4	1200	65	2169	3871	2709	2701	2683	2578	2638	2601	2702	2680	2744	2586	2769	2727	2570	2521	2659	2537	2700	2596	]
G [	2622	2578	2604	2634	2520	2778	2586	2686	2544	2651	2752	2854	2682	2804	2710	2770	2618	2835	2585	2852	2604	2628	3471	5251	5	26	6	9203	891	7599	1545	2484	2388	2844	2694	2866	2745	2755	2797	2688	2528	2834	2571	2634	2637	2693	2594	2590	2579	2633	]
T [	1990	2121	1957	1914	2052	1910	1907	2099	2098	1909	1945	1857	2126	1892	1963	1818	1902	1904	2098	1784	1951	1720	1873	3369	6	19	44	0	6330	1524	2463	1759	2451	1872	2142	1837	2056	2043	2056	1947	2118	1891	2145	1903	2175	1953	2049	2184	2084	2107	]

Hypothetical CWM

A [	0.00	0.00	0.01	-0.00	0.00	0.00	0.06	-0.06	0.01	-0.01	-0.04	0.03	-0.01	0.00	-0.00	0.00	]
C [	0.01	0.01	0.01	0.02	-0.03	0.09	-0.03	0.10	-0.02	0.03	-0.04	0.03	0.02	0.01	0.01	0.01	]
G [	0.01	0.01	0.01	0.02	0.04	-0.04	0.03	-0.02	0.10	-0.03	0.08	-0.03	0.02	0.01	0.01	0.01	]
T [	0.00	-0.00	0.00	-0.01	0.03	-0.04	-0.01	0.01	-0.06	0.05	0.01	0.01	-0.00	0.01	0.00	0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1621

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1546

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1267

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1061

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 650

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 549

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 431

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 429

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 229

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 91

CWM

PFM

HCWM

6 profiles found for the same TF (BHLHE40) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000970.1	BHLHE40	ENCSR000BID	HepG2	Homo sapiens	MA0464.3
BP000971.1	BHLHE40	ENCSR000DYJ	A549	Homo sapiens	MA0464.3
BP000973.1	BHLHE40	ENCSR000EDT	HepG2	Homo sapiens	MA0464.3
BP000974.1	BHLHE40	ENCSR000EGV	K562	Homo sapiens	MA0464.3
BP000975.1	BHLHE40	ENCSR957KYB	IMR-90	Homo sapiens	MA0464.3
BP000976.1	BHLHE40	ENCSR987MTA	GM12878	Homo sapiens	MA0464.3