JASPAR - BHLHE40 - BP000976.1

This page shows detailed deep learning-derived predictions and motifs for BHLHE40 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	BHLHE40
Model ID:	BP000976.1
Cell line/tissue:	GM12878
Class:	Basic helix-loop-helix factors (bHLH)
Family:	Hairy-related factors
JASPAR ID:	MA0464.3
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	O14503
Source:	ENCSR987MTA
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 17718

Contribution weight matrix (CWM)

A [	-0.00	0.00	-0.00	0.00	0.00	0.03	0.00	0.00	-0.00	-0.00	0.01	-0.00	-0.00	-0.00	-0.00	]
C [	0.00	0.00	0.00	-0.00	0.07	-0.00	0.09	0.00	0.00	0.00	0.02	0.01	0.00	0.00	0.00	]
G [	0.00	0.00	0.01	0.01	0.00	0.00	0.00	0.09	-0.00	0.09	-0.00	0.00	0.00	0.00	0.00	]
T [	-0.00	-0.00	-0.00	0.01	-0.00	-0.00	0.00	0.00	0.06	-0.00	0.00	-0.00	0.00	-0.00	-0.00	]

Frequency matrix

A [	4124	4689	3660	3389	4767	3381	3790	3429	3863	3607	3713	4264	3837	3156	4609	3363	4967	3225	4312	2811	11383	10	52	49	4	5653	3438	3641	3671	3090	4674	3493	3655	3188	3541	3401	4146	3249	3631	3476	4590	4272	3634	3397	3805	3431	3608	4053	3692	3828	]
C [	4774	4840	4761	5000	4760	4812	5619	5286	4690	4885	5073	5338	5215	5416	4910	5830	4302	4539	3083	14270	1818	17505	22	61	14	11104	7307	5097	5376	6011	4760	5751	4812	6041	5808	5780	4919	5319	5828	4951	4718	5324	4700	5288	4647	4991	4731	4813	4811	4812	]
G [	5382	4710	5465	4573	4758	5908	5147	4720	5792	5770	5834	4848	5025	4648	5081	5224	5039	7847	5193	398	2938	23	17637	34	17684	243	4092	4686	5449	4830	4989	4961	5489	5025	4900	4578	5326	5603	4779	4632	5041	4548	4788	4644	4895	5048	5341	5028	5194	5318	]
T [	3438	3479	3832	4756	3433	3617	3162	4283	3373	3456	3098	3268	3641	4498	3118	3301	3410	2107	5130	239	1579	180	7	17574	16	718	2881	4294	3222	3787	3295	3513	3762	3464	3469	3959	3327	3547	3480	4659	3369	3574	4596	4389	4371	4248	4038	3824	4021	3760	]

Hypothetical CWM

A [	-0.00	0.00	0.00	-0.00	0.00	0.01	0.04	-0.06	0.01	-0.01	-0.04	0.03	-0.01	0.00	-0.00	0.00	]
C [	0.01	0.01	0.01	0.01	-0.02	0.08	-0.03	0.09	-0.02	0.01	-0.05	0.04	0.02	0.01	0.01	0.01	]
G [	0.01	0.01	0.01	0.02	0.03	-0.04	0.02	-0.02	0.09	-0.03	0.09	-0.03	0.02	0.01	0.01	0.01	]
T [	-0.00	-0.00	0.00	-0.01	0.02	-0.04	-0.01	0.01	-0.06	0.06	0.00	-0.00	-0.00	0.00	0.00	-0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 4272

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2973

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1567

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1500

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 601

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 517

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 414

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 404

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 148

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 144

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 87

CWM

PFM

HCWM

6 profiles found for the same TF (BHLHE40) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000970.1	BHLHE40	ENCSR000BID	HepG2	Homo sapiens	MA0464.3
BP000971.1	BHLHE40	ENCSR000DYJ	A549	Homo sapiens	MA0464.3
BP000972.1	BHLHE40	ENCSR000DZJ	GM12878	Homo sapiens	MA0464.3
BP000973.1	BHLHE40	ENCSR000EDT	HepG2	Homo sapiens	MA0464.3
BP000974.1	BHLHE40	ENCSR000EGV	K562	Homo sapiens	MA0464.3
BP000975.1	BHLHE40	ENCSR957KYB	IMR-90	Homo sapiens	MA0464.3