JASPAR - BHLHE40 - BP000970.1

This page shows detailed deep learning-derived predictions and motifs for BHLHE40 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	BHLHE40
Model ID:	BP000970.1
Cell line/tissue:	HepG2
Class:	Basic helix-loop-helix factors (bHLH)
Family:	Hairy-related factors
JASPAR ID:	MA0464.3
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	O14503
Source:	ENCSR000BID
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 2514

Contribution weight matrix (CWM)

A [	-0.00	-0.00	-0.00	-0.00	-0.00	0.00	0.05	0.00	-0.00	-0.00	-0.00	0.01	-0.00	-0.00	-0.00	]
C [	0.00	0.00	0.00	0.00	-0.00	0.06	-0.00	0.07	-0.00	0.00	-0.00	0.00	0.00	0.00	-0.00	]
G [	-0.00	-0.00	0.00	0.00	0.02	-0.00	0.00	-0.00	0.07	-0.00	0.06	-0.00	0.00	0.00	0.00	]
T [	0.00	-0.00	-0.00	-0.00	0.01	-0.00	-0.00	-0.00	0.00	0.04	0.00	-0.00	-0.00	-0.00	-0.00	]

Frequency matrix

A [	510	492	529	468	509	504	547	519	466	455	487	490	490	440	467	454	460	453	460	448	471	423	519	508	163	69	2445	0	43	135	6	1214	300	405	468	440	511	467	475	422	478	478	482	409	457	489	505	453	479	485	]
C [	766	768	777	805	750	766	740	768	744	820	759	776	773	815	819	824	792	794	826	865	858	871	765	631	86	2441	20	2490	10	183	9	570	1169	871	734	764	718	754	714	725	799	781	812	795	790	756	749	798	747	785	]
G [	711	761	732	757	759	740	757	746	783	765	783	775	787	769	744	754	795	829	757	740	744	739	856	863	1627	1	33	4	2460	221	2364	438	647	644	857	805	840	831	817	851	762	761	762	786	776	767	790	783	769	739	]
T [	527	493	476	484	496	504	470	481	521	474	485	473	464	490	484	482	467	438	471	461	441	481	374	512	638	3	16	20	1	1975	135	292	398	594	455	505	445	462	508	516	475	494	458	524	491	502	470	480	519	505	]

Hypothetical CWM

A [	-0.00	-0.00	-0.00	-0.01	-0.01	0.00	0.05	-0.05	-0.01	-0.01	-0.03	0.02	-0.01	-0.00	-0.00	0.00	]
C [	0.01	0.01	0.00	0.01	-0.03	0.06	-0.02	0.07	-0.03	0.00	-0.05	0.02	0.01	0.01	0.00	0.00	]
G [	0.00	-0.00	0.01	0.01	0.02	-0.05	-0.00	-0.03	0.07	-0.02	0.06	-0.03	0.01	0.00	0.01	0.00	]
T [	0.00	-0.00	-0.00	-0.00	0.02	-0.03	-0.01	-0.01	-0.05	0.04	0.00	-0.01	-0.01	-0.00	-0.00	-0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 241

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 209

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 97

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 94

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 40

CWM

PFM

HCWM

6 profiles found for the same TF (BHLHE40) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000971.1	BHLHE40	ENCSR000DYJ	A549	Homo sapiens	MA0464.3
BP000972.1	BHLHE40	ENCSR000DZJ	GM12878	Homo sapiens	MA0464.3
BP000973.1	BHLHE40	ENCSR000EDT	HepG2	Homo sapiens	MA0464.3
BP000974.1	BHLHE40	ENCSR000EGV	K562	Homo sapiens	MA0464.3
BP000975.1	BHLHE40	ENCSR957KYB	IMR-90	Homo sapiens	MA0464.3
BP000976.1	BHLHE40	ENCSR987MTA	GM12878	Homo sapiens	MA0464.3