JASPAR - BHLHE40 - BP000975.1

This page shows detailed deep learning-derived predictions and motifs for BHLHE40 in IMR-90 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	BHLHE40
Model ID:	BP000975.1
Cell line/tissue:	IMR-90
Class:	Basic helix-loop-helix factors (bHLH)
Family:	Hairy-related factors
JASPAR ID:	MA0464.3
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	O14503
Source:	ENCSR957KYB
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 11975

Contribution weight matrix (CWM)

A [	-0.00	-0.00	0.00	-0.00	-0.00	-0.00	0.05	0.00	0.00	-0.00	-0.00	0.01	-0.00	-0.00	-0.00	]
C [	0.00	0.00	0.00	0.00	-0.00	0.08	-0.00	0.10	0.00	0.00	0.00	0.01	0.01	0.00	0.00	]
G [	0.00	0.00	0.00	0.01	0.03	0.00	0.00	0.00	0.10	-0.00	0.06	-0.00	0.00	0.00	0.00	]
T [	0.00	-0.00	-0.00	-0.00	0.01	0.00	-0.00	0.00	0.00	0.03	0.00	0.00	-0.00	0.00	-0.00	]

Frequency matrix

A [	2764	2511	2667	2677	2590	2647	2667	2504	2679	2561	2699	2463	2536	2651	2640	2570	2469	2425	2446	2368	3257	2333	577	27	11794	0	79	1341	222	3355	1727	2362	2425	2367	2540	2610	2405	2448	2521	2519	2690	2396	2702	2583	2757	2621	2587	2450	2678	2555	]
C [	3285	3493	3324	3360	3299	3370	3310	3462	3250	3363	3320	3365	3397	3464	3453	3461	3359	3675	3520	3655	3421	2959	133	11909	63	11937	3	1798	229	3125	4703	3378	3195	3184	3271	3212	3290	3319	3468	3396	3179	3541	3343	3255	3178	3315	3237	3446	3293	3431	]
G [	3317	3273	3397	3246	3536	3285	3315	3287	3424	3470	3439	3395	3454	3304	3434	3530	3652	3320	3515	3334	3476	4457	7169	26	68	13	11890	1736	8880	2104	3037	3179	3821	3570	3791	3496	3615	3474	3383	3349	3533	3317	3336	3343	3484	3288	3493	3276	3325	3324	]
T [	2609	2698	2587	2692	2550	2673	2683	2722	2622	2581	2517	2752	2588	2556	2448	2414	2495	2555	2494	2618	1821	2226	4096	13	50	25	3	7100	2644	3391	2508	3056	2534	2854	2373	2657	2665	2734	2603	2711	2573	2721	2594	2794	2556	2751	2658	2803	2679	2665	]

Hypothetical CWM

A [	-0.00	-0.00	0.00	-0.00	-0.01	0.00	0.05	-0.07	0.01	-0.02	-0.04	0.02	-0.01	-0.00	-0.00	-0.00	]
C [	0.01	0.01	0.01	0.02	-0.04	0.08	-0.03	0.10	-0.05	0.01	-0.05	0.03	0.02	0.01	0.00	0.01	]
G [	0.01	0.01	0.01	0.02	0.04	-0.05	0.00	-0.05	0.10	-0.02	0.07	-0.03	0.01	0.01	0.01	0.01	]
T [	-0.00	-0.00	-0.00	-0.01	0.02	-0.05	-0.02	0.01	-0.06	0.04	0.01	0.00	-0.00	0.00	-0.00	-0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 9963

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2579

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 462

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 442

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 129

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 30

CWM

PFM

HCWM

6 profiles found for the same TF (BHLHE40) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000970.1	BHLHE40	ENCSR000BID	HepG2	Homo sapiens	MA0464.3
BP000971.1	BHLHE40	ENCSR000DYJ	A549	Homo sapiens	MA0464.3
BP000972.1	BHLHE40	ENCSR000DZJ	GM12878	Homo sapiens	MA0464.3
BP000973.1	BHLHE40	ENCSR000EDT	HepG2	Homo sapiens	MA0464.3
BP000974.1	BHLHE40	ENCSR000EGV	K562	Homo sapiens	MA0464.3
BP000976.1	BHLHE40	ENCSR987MTA	GM12878	Homo sapiens	MA0464.3