JASPAR - BHLHE40 - BP000973.1

This page shows detailed deep learning-derived predictions and motifs for BHLHE40 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	BHLHE40
Model ID:	BP000973.1
Cell line/tissue:	HepG2
Class:	Basic helix-loop-helix factors (bHLH)
Family:	Hairy-related factors
JASPAR ID:	MA0464.3
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	O14503
Source:	ENCSR000EDT
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 8229

Contribution weight matrix (CWM)

A [	-0.00	-0.00	-0.00	0.00	0.00	0.05	0.00	-0.00	-0.00	0.00	0.01	-0.00	-0.00	-0.00	]
C [	0.00	0.00	0.00	-0.01	0.08	-0.00	0.11	-0.00	0.00	0.00	0.02	0.01	0.00	0.00	]
G [	0.00	0.00	0.01	0.01	0.00	0.00	-0.00	0.11	-0.00	0.09	-0.00	0.00	0.00	0.00	]
T [	-0.00	-0.00	-0.00	0.01	0.00	-0.00	0.00	0.00	0.07	-0.00	-0.00	-0.00	-0.00	-0.00	]

Frequency matrix

A [	1860	1739	1640	1877	1655	1786	1595	1785	1683	1698	1864	1712	1523	1962	1611	2101	1437	1696	1097	6385	2	90	31	11	2510	1709	1372	1673	1599	1834	1634	1647	1649	1692	1650	1804	1541	1752	1686	1858	1829	1758	1685	1804	1716	1752	1772	1721	1749	1755	]
C [	2448	2352	2478	2305	2329	2437	2487	2371	2433	2517	2473	2604	2520	2318	2543	1931	2262	1500	7055	579	8016	22	41	13	4941	2981	2569	2371	2528	2365	2579	2437	2453	2372	2518	2335	2623	2443	2413	2271	2449	2336	2445	2333	2432	2290	2366	2289	2296	2288	]
G [	2343	2451	2283	2330	2497	2443	2367	2423	2441	2452	2277	2292	2228	2452	2323	2727	3595	1894	43	752	49	8115	23	8154	238	1947	2402	2634	2505	2489	2419	2536	2440	2493	2400	2490	2381	2375	2274	2502	2282	2330	2249	2271	2267	2410	2324	2389	2412	2372	]
T [	1578	1687	1828	1717	1748	1563	1780	1650	1672	1562	1615	1621	1958	1497	1752	1470	935	3139	34	513	162	2	8134	51	540	1592	1886	1551	1597	1541	1597	1609	1687	1672	1661	1600	1684	1659	1856	1598	1669	1805	1850	1821	1814	1777	1767	1830	1772	1814	]

Hypothetical CWM

A [	0.00	0.00	0.01	-0.00	0.01	0.01	0.06	-0.07	0.00	-0.02	-0.04	0.03	-0.00	-0.00	0.00	-0.00	]
C [	0.01	0.01	0.01	0.02	-0.03	0.09	-0.03	0.11	-0.04	0.02	-0.06	0.04	0.02	0.02	0.01	0.01	]
G [	0.01	0.01	0.02	0.02	0.04	-0.06	0.02	-0.04	0.11	-0.03	0.09	-0.03	0.02	0.01	0.01	0.01	]
T [	-0.00	0.00	-0.00	-0.01	0.03	-0.05	-0.02	0.00	-0.07	0.07	0.01	-0.00	-0.01	0.01	0.00	0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 859

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 581

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 510

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 476

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 453

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 273

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 265

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 242

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 23

CWM

PFM

HCWM

6 profiles found for the same TF (BHLHE40) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000970.1	BHLHE40	ENCSR000BID	HepG2	Homo sapiens	MA0464.3
BP000971.1	BHLHE40	ENCSR000DYJ	A549	Homo sapiens	MA0464.3
BP000972.1	BHLHE40	ENCSR000DZJ	GM12878	Homo sapiens	MA0464.3
BP000974.1	BHLHE40	ENCSR000EGV	K562	Homo sapiens	MA0464.3
BP000975.1	BHLHE40	ENCSR957KYB	IMR-90	Homo sapiens	MA0464.3
BP000976.1	BHLHE40	ENCSR987MTA	GM12878	Homo sapiens	MA0464.3