JASPAR - BHLHE40 - BP000975.1

This page shows detailed deep learning-derived predictions and motifs for BHLHE40 in IMR-90 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	BHLHE40
Model ID:	BP000975.1
Cell line/tissue:	IMR-90
Class:	Basic helix-loop-helix factors (bHLH)
Family:	Hairy-related factors
JASPAR ID:	MA0464.3
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	O14503
Source:	ENCSR957KYB
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 11975

Contribution weight matrix (CWM)

A [	-0.00	0.00	-0.00	0.00	0.00	0.03	0.00	0.00	-0.00	0.00	0.01	-0.00	-0.00	-0.00	0.00	]
C [	0.00	0.00	0.00	-0.00	0.06	-0.00	0.10	0.00	0.00	0.00	0.03	0.01	0.00	0.00	0.00	]
G [	0.00	0.00	0.01	0.01	0.00	0.00	0.00	0.10	-0.00	0.08	-0.00	0.00	0.00	0.00	0.00	]
T [	-0.00	-0.00	-0.00	0.01	-0.00	-0.00	0.00	0.00	0.05	-0.00	-0.00	-0.00	0.00	-0.00	-0.00	]

Frequency matrix

A [	2665	2679	2803	2658	2751	2556	2794	2594	2721	2573	2711	2603	2734	2665	2657	2373	2854	2534	3056	2508	3391	2644	7100	3	25	50	13	4096	2226	1821	2618	2494	2555	2495	2414	2448	2556	2588	2752	2517	2581	2622	2722	2683	2673	2550	2692	2587	2698	2609	]
C [	3324	3325	3276	3493	3288	3484	3343	3336	3317	3533	3349	3383	3474	3615	3496	3791	3570	3821	3179	3037	2104	8880	1736	11890	13	68	26	7169	4457	3476	3334	3515	3320	3652	3530	3434	3304	3454	3395	3439	3470	3424	3287	3315	3285	3536	3246	3397	3273	3317	]
G [	3431	3293	3446	3237	3315	3178	3255	3343	3541	3179	3396	3468	3319	3290	3212	3271	3184	3195	3378	4703	3125	229	1798	3	11937	63	11909	133	2959	3421	3655	3520	3675	3359	3461	3453	3464	3397	3365	3320	3363	3250	3462	3310	3370	3299	3360	3324	3493	3285	]
T [	2555	2678	2450	2587	2621	2757	2583	2702	2396	2690	2519	2521	2448	2405	2610	2540	2367	2425	2362	1727	3355	222	1341	79	0	11794	27	577	2333	3257	2368	2446	2425	2469	2570	2640	2651	2536	2463	2699	2561	2679	2504	2667	2647	2590	2677	2667	2511	2764	]

Hypothetical CWM

A [	-0.00	-0.00	0.00	-0.00	0.00	0.01	0.04	-0.06	0.01	-0.02	-0.05	0.02	-0.01	-0.00	-0.00	-0.00	]
C [	0.01	0.01	0.01	0.01	-0.03	0.07	-0.02	0.10	-0.05	0.00	-0.05	0.04	0.02	0.01	0.01	0.01	]
G [	0.01	0.00	0.01	0.02	0.03	-0.05	0.01	-0.05	0.10	-0.03	0.08	-0.04	0.02	0.01	0.01	0.01	]
T [	-0.00	-0.00	-0.00	-0.01	0.02	-0.04	-0.02	0.01	-0.07	0.05	0.00	-0.01	-0.00	0.00	-0.00	-0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 9963

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2579

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 462

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 442

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 129

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 30

CWM

PFM

HCWM

6 profiles found for the same TF (BHLHE40) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000970.1	BHLHE40	ENCSR000BID	HepG2	Homo sapiens	MA0464.3
BP000971.1	BHLHE40	ENCSR000DYJ	A549	Homo sapiens	MA0464.3
BP000972.1	BHLHE40	ENCSR000DZJ	GM12878	Homo sapiens	MA0464.3
BP000973.1	BHLHE40	ENCSR000EDT	HepG2	Homo sapiens	MA0464.3
BP000974.1	BHLHE40	ENCSR000EGV	K562	Homo sapiens	MA0464.3
BP000976.1	BHLHE40	ENCSR987MTA	GM12878	Homo sapiens	MA0464.3