JASPAR - BHLHE40 - BP000974.1

This page shows detailed deep learning-derived predictions and motifs for BHLHE40 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	BHLHE40
Model ID:	BP000974.1
Cell line/tissue:	K562
Class:	Basic helix-loop-helix factors (bHLH)
Family:	Hairy-related factors
JASPAR ID:	MA0464.3
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	O14503
Source:	ENCSR000EGV
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 12008

Contribution weight matrix (CWM)

A [	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	0.06	-0.00	-0.00	-0.00	-0.00	0.01	-0.00	-0.00	-0.00	]
C [	0.00	0.00	0.00	0.00	-0.00	0.09	-0.00	0.11	-0.00	0.00	-0.00	0.01	0.01	0.00	0.00	]
G [	0.00	0.00	0.00	0.01	0.03	0.00	0.00	-0.00	0.11	-0.00	0.08	-0.01	0.00	0.00	0.00	]
T [	-0.00	-0.00	-0.00	-0.00	0.01	-0.00	-0.00	-0.00	0.00	0.04	0.00	-0.00	-0.00	-0.00	-0.00	]

Frequency matrix

A [	2618	2674	2634	2482	2652	2669	2620	2734	2615	2401	2744	2352	2441	2253	2487	2396	2336	2554	2230	2183	2500	2154	2951	2330	427	56	11768	1	23	872	73	4358	1447	2229	2458	2188	2714	2414	2276	2305	2372	2380	2615	2178	2513	2447	2884	2427	2462	2326	]
C [	3559	3554	3427	3601	3475	3410	3350	3359	3297	3595	3274	3428	3636	3640	3473	3689	3764	3710	3718	3876	3460	3760	3563	2659	225	11921	67	11975	3	1330	129	2945	5456	3822	3351	3342	3464	3402	3433	3637	3676	3580	3319	3640	3649	3321	3247	3660	3291	3692	]
G [	3354	3271	3374	3382	3465	3300	3591	3381	3527	3316	3467	3748	3714	3379	3616	3486	3663	3313	3662	3343	3801	3577	3541	4594	7322	22	112	4	11982	1116	10288	2279	3045	2852	3823	3628	3623	3696	3665	3563	3500	3474	3677	3648	3428	3412	3528	3305	3460	3321	]
T [	2477	2509	2573	2543	2416	2629	2447	2534	2569	2696	2523	2480	2217	2736	2432	2437	2245	2431	2398	2606	2247	2517	1953	2425	4034	9	61	28	0	8690	1518	2426	2060	3105	2376	2850	2207	2496	2634	2503	2460	2574	2397	2542	2418	2828	2349	2616	2795	2669	]

Hypothetical CWM

A [	-0.00	-0.00	0.00	-0.01	-0.01	0.00	0.06	-0.07	0.01	-0.01	-0.04	0.03	-0.02	-0.00	-0.00	-0.00	]
C [	0.01	0.01	0.01	0.02	-0.04	0.09	-0.03	0.11	-0.05	0.03	-0.05	0.04	0.02	0.01	0.01	0.01	]
G [	0.01	0.01	0.01	0.02	0.05	-0.05	0.02	-0.05	0.11	-0.03	0.09	-0.03	0.02	0.01	0.01	0.01	]
T [	-0.00	-0.00	-0.00	-0.01	0.03	-0.04	-0.02	0.00	-0.07	0.05	0.01	-0.00	-0.00	0.00	-0.00	-0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 5475

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3022

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1860

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1115

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 39

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 30

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 20

CWM

PFM

HCWM

6 profiles found for the same TF (BHLHE40) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000970.1	BHLHE40	ENCSR000BID	HepG2	Homo sapiens	MA0464.3
BP000971.1	BHLHE40	ENCSR000DYJ	A549	Homo sapiens	MA0464.3
BP000972.1	BHLHE40	ENCSR000DZJ	GM12878	Homo sapiens	MA0464.3
BP000973.1	BHLHE40	ENCSR000EDT	HepG2	Homo sapiens	MA0464.3
BP000975.1	BHLHE40	ENCSR957KYB	IMR-90	Homo sapiens	MA0464.3
BP000976.1	BHLHE40	ENCSR987MTA	GM12878	Homo sapiens	MA0464.3