JASPAR - BHLHE40 - BP000973.1

This page shows detailed deep learning-derived predictions and motifs for BHLHE40 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	BHLHE40
Model ID:	BP000973.1
Cell line/tissue:	HepG2
Class:	Basic helix-loop-helix factors (bHLH)
Family:	Hairy-related factors
JASPAR ID:	MA0464.3
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	O14503
Source:	ENCSR000EDT
Model:	BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 8229

Contribution weight matrix (CWM)

A [	-0.00	-0.00	-0.00	-0.00	-0.00	0.07	0.00	0.00	-0.00	0.00	0.01	-0.00	-0.00	-0.00	]
C [	0.00	0.00	0.00	-0.00	0.09	-0.00	0.11	-0.00	0.00	0.00	0.01	0.01	0.00	0.00	]
G [	0.00	0.00	0.01	0.02	0.00	0.00	-0.00	0.11	-0.00	0.08	-0.01	0.00	0.00	0.00	]
T [	-0.00	-0.00	-0.00	0.01	0.00	-0.00	-0.00	0.00	0.05	0.00	0.00	-0.00	-0.00	-0.00	]

Frequency matrix

A [	1814	1772	1830	1767	1777	1814	1821	1850	1805	1669	1598	1856	1659	1684	1600	1661	1672	1687	1609	1597	1541	1597	1551	1886	1592	540	51	8134	2	162	513	34	3139	935	1470	1752	1497	1958	1621	1615	1562	1672	1650	1780	1563	1748	1717	1828	1687	1578	]
C [	2372	2412	2389	2324	2410	2267	2271	2249	2330	2282	2502	2274	2375	2381	2490	2400	2493	2440	2536	2419	2489	2505	2634	2402	1947	238	8154	23	8115	49	752	43	1894	3595	2727	2323	2452	2228	2292	2277	2452	2441	2423	2367	2443	2497	2330	2283	2451	2343	]
G [	2288	2296	2289	2366	2290	2432	2333	2445	2336	2449	2271	2413	2443	2623	2335	2518	2372	2453	2437	2579	2365	2528	2371	2569	2981	4941	13	41	22	8016	579	7055	1500	2262	1931	2543	2318	2520	2604	2473	2517	2433	2371	2487	2437	2329	2305	2478	2352	2448	]
T [	1755	1749	1721	1772	1752	1716	1804	1685	1758	1829	1858	1686	1752	1541	1804	1650	1692	1649	1647	1634	1834	1599	1673	1372	1709	2510	11	31	90	2	6385	1097	1696	1437	2101	1611	1962	1523	1712	1864	1698	1683	1785	1595	1786	1655	1877	1640	1739	1860	]

Hypothetical CWM

A [	0.00	0.00	0.01	-0.01	-0.00	0.01	0.07	-0.07	0.00	-0.02	-0.05	0.03	-0.01	-0.00	0.00	-0.00	]
C [	0.01	0.01	0.01	0.02	-0.03	0.09	-0.03	0.11	-0.04	0.02	-0.06	0.04	0.02	0.02	0.01	0.01	]
G [	0.01	0.01	0.02	0.02	0.04	-0.06	0.02	-0.04	0.11	-0.03	0.09	-0.03	0.02	0.01	0.01	0.01	]
T [	-0.00	0.00	-0.00	-0.00	0.03	-0.04	-0.02	0.00	-0.07	0.06	0.01	0.01	-0.00	0.01	0.00	0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 859

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 581

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 510

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 476

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 453

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 273

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 265

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 242

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 23

CWM

PFM

HCWM

6 profiles found for the same TF (BHLHE40) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000970.1	BHLHE40	ENCSR000BID	HepG2	Homo sapiens	MA0464.3
BP000971.1	BHLHE40	ENCSR000DYJ	A549	Homo sapiens	MA0464.3
BP000972.1	BHLHE40	ENCSR000DZJ	GM12878	Homo sapiens	MA0464.3
BP000974.1	BHLHE40	ENCSR000EGV	K562	Homo sapiens	MA0464.3
BP000975.1	BHLHE40	ENCSR957KYB	IMR-90	Homo sapiens	MA0464.3
BP000976.1	BHLHE40	ENCSR987MTA	GM12878	Homo sapiens	MA0464.3