JASPAR - BHLHE40 - BP000970.1

This page shows detailed deep learning-derived predictions and motifs for BHLHE40 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	BHLHE40
Model ID:	BP000970.1
Cell line/tissue:	HepG2
Class:	Basic helix-loop-helix factors (bHLH)
Family:	Hairy-related factors
JASPAR ID:	MA0464.3
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	O14503
Source:	ENCSR000BID
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 2514

Contribution weight matrix (CWM)

A [	-0.00	-0.00	-0.00	-0.00	0.00	0.04	0.00	-0.00	-0.00	-0.00	0.01	-0.00	-0.00	-0.00	0.00	]
C [	0.00	0.00	0.00	-0.00	0.06	-0.00	0.07	-0.00	0.00	-0.00	0.02	0.00	0.00	-0.00	-0.00	]
G [	-0.00	0.00	0.00	0.00	-0.00	0.00	-0.00	0.07	-0.00	0.06	-0.00	0.00	0.00	0.00	0.00	]
T [	-0.00	-0.00	-0.00	0.01	-0.00	-0.00	-0.00	0.00	0.05	0.00	-0.00	-0.00	-0.00	-0.00	-0.00	]

Frequency matrix

A [	505	519	480	470	502	491	524	458	494	475	516	508	462	445	505	455	594	398	292	135	1975	1	20	16	3	638	512	374	481	441	461	471	438	467	482	484	490	464	473	485	474	521	481	470	504	496	484	476	493	527	]
C [	739	769	783	790	767	776	786	762	761	762	851	817	831	840	805	857	644	647	438	2364	221	2460	4	33	1	1627	863	856	739	744	740	757	829	795	754	744	769	787	775	783	765	783	746	757	740	759	757	732	761	711	]
G [	785	747	798	749	756	790	795	812	781	799	725	714	754	718	764	734	871	1169	570	9	183	10	2490	20	2441	86	631	765	871	858	865	826	794	792	824	819	815	773	776	759	820	744	768	740	766	750	805	777	768	766	]
T [	485	479	453	505	489	457	409	482	478	478	422	475	467	511	440	468	405	300	1214	6	135	43	0	2445	69	163	508	519	423	471	448	460	453	460	454	467	440	490	490	487	455	466	519	547	504	509	468	529	492	510	]

Hypothetical CWM

A [	-0.00	-0.00	-0.00	-0.01	-0.01	0.00	0.04	-0.05	-0.01	-0.01	-0.03	0.02	-0.00	-0.00	-0.00	0.00	]
C [	0.00	0.01	0.00	0.01	-0.03	0.06	-0.02	0.07	-0.03	-0.00	-0.05	0.02	0.01	0.01	-0.00	0.00	]
G [	0.00	0.00	0.01	0.01	0.02	-0.05	0.00	-0.03	0.07	-0.02	0.06	-0.03	0.01	0.00	0.01	0.01	]
T [	0.00	-0.00	-0.00	-0.01	0.02	-0.03	-0.01	-0.01	-0.05	0.05	0.00	-0.01	-0.01	-0.00	-0.00	-0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 241

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 209

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 97

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 94

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 40

CWM

PFM

HCWM

6 profiles found for the same TF (BHLHE40) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000971.1	BHLHE40	ENCSR000DYJ	A549	Homo sapiens	MA0464.3
BP000972.1	BHLHE40	ENCSR000DZJ	GM12878	Homo sapiens	MA0464.3
BP000973.1	BHLHE40	ENCSR000EDT	HepG2	Homo sapiens	MA0464.3
BP000974.1	BHLHE40	ENCSR000EGV	K562	Homo sapiens	MA0464.3
BP000975.1	BHLHE40	ENCSR957KYB	IMR-90	Homo sapiens	MA0464.3
BP000976.1	BHLHE40	ENCSR987MTA	GM12878	Homo sapiens	MA0464.3