JASPAR - ZNF24 - BP000938.1

This page shows detailed deep learning-derived predictions and motifs for ZNF24 in HEK293 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ZNF24
Model ID:	BP000938.1
Cell line/tissue:	HEK293
Class:	C2H2 zinc finger factors
Family:	More than 3 adjacent zinc fingers
JASPAR ID:	MA1124.1
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P17028
Source:	ENCSR984MDV
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_2

Number of seqlets: 1175

Contribution weight matrix (CWM)

A [	-0.00	0.01	0.00	-0.00	-0.00	0.02	0.01	-0.00	-0.00	0.03	0.01	-0.00	-0.00	0.03	0.02	-0.00	-0.00	0.03	0.01	-0.00	-0.00	0.02	0.01	-0.00	-0.00	0.01	0.01	-0.00	-0.00	0.01	]
C [	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	-0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	]
G [	0.01	0.00	-0.00	0.00	0.01	0.00	-0.00	0.00	0.02	-0.00	-0.00	0.00	0.02	-0.00	-0.00	-0.00	0.02	-0.00	-0.00	0.00	0.02	-0.00	-0.00	0.00	0.01	0.00	-0.00	0.00	0.01	0.00	]
T [	-0.00	-0.00	0.00	0.01	0.00	-0.00	-0.00	0.01	0.00	-0.00	0.00	0.02	0.00	-0.00	0.00	0.02	0.00	-0.00	0.00	0.02	0.00	-0.00	0.00	0.02	0.00	-0.00	-0.00	0.01	0.00	-0.00	]

Frequency matrix

A [	537	286	215	588	516	250	219	653	585	166	158	826	715	87	120	1033	900	36	53	1136	1052	11	24	1160	1054	6	20	1160	1034	3	23	1130	948	46	69	974	820	82	165	763	681	180	263	615	562	242	292	561	500	253	]
C [	182	170	181	160	175	150	122	97	160	114	79	81	98	105	47	34	53	65	8	15	14	40	17	7	14	31	7	7	23	28	42	23	41	70	58	66	71	129	88	139	113	173	137	161	161	197	182	184	166	209	]
G [	238	203	424	236	237	160	520	295	200	129	742	199	212	75	926	76	165	51	1093	18	104	19	1115	4	96	18	1134	7	96	22	1084	16	135	58	980	82	187	106	822	164	223	195	582	214	268	194	480	239	287	239	]
T [	218	516	355	191	247	615	314	130	230	766	196	69	150	908	82	32	57	1023	21	6	5	1105	19	4	11	1120	14	1	22	1122	26	6	51	1001	68	53	97	858	100	109	158	627	193	185	184	542	221	191	222	474	]

Hypothetical CWM

A [	-0.00	-0.00	0.01	0.01	-0.01	-0.00	0.02	0.01	-0.01	-0.01	0.03	0.02	-0.02	-0.01	0.03	0.02	-0.02	-0.01	0.03	0.02	-0.02	-0.01	0.02	0.01	-0.01	-0.01	0.02	0.01	-0.01	-0.01	0.01	0.00	-0.01	-0.00	0.00	]
C [	0.01	-0.00	0.00	0.00	0.01	-0.00	0.00	0.00	0.01	-0.01	0.01	0.00	0.01	-0.01	0.01	0.00	0.01	-0.01	0.01	0.00	0.01	-0.00	0.01	0.00	0.01	0.00	0.01	0.00	0.01	0.00	0.01	0.00	0.01	0.00	0.01	]
G [	0.00	0.01	-0.00	0.00	0.00	0.01	-0.00	0.00	-0.00	0.02	-0.01	0.00	-0.00	0.02	-0.01	0.00	-0.00	0.02	-0.01	0.00	-0.00	0.02	-0.01	0.00	0.00	0.01	-0.01	0.00	0.00	0.01	-0.00	0.00	0.00	0.01	-0.00	]
T [	0.00	0.00	-0.00	-0.00	0.01	0.00	-0.01	-0.00	0.01	0.01	-0.01	-0.00	0.02	0.01	-0.01	-0.00	0.02	0.01	-0.01	-0.00	0.02	0.01	-0.01	-0.00	0.02	0.01	-0.01	-0.00	0.01	0.00	-0.01	-0.00	0.01	0.00	-0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 3381

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3264

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 353

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 294

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 213

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 123

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 116

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 115

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 86

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 59

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 33

CWM

PFM

HCWM

8 profiles found for the same TF (ZNF24) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000930.1	ZNF24	ENCSR072PWP	GM12878	Homo sapiens	MA1124.1
BP000931.1	ZNF24	ENCSR099NCH	K562	Homo sapiens	MA1124.1
BP000932.1	ZNF24	ENCSR117WTM	K562	Homo sapiens	MA1124.1
BP000933.1	ZNF24	ENCSR362NWP	HepG2	Homo sapiens	MA1124.1
BP000934.1	ZNF24	ENCSR385AHH	K562	Homo sapiens	MA1124.1
BP000935.1	ZNF24	ENCSR503VTG	MCF-7	Homo sapiens	MA1124.1
BP000936.1	ZNF24	ENCSR695EQB	K562	Homo sapiens	MA1124.1
BP000937.1	ZNF24	ENCSR791AGT	HepG2	Homo sapiens	MA1124.1