JASPAR - ZNF24 - BP000936.1

This page shows detailed deep learning-derived predictions and motifs for ZNF24 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ZNF24
Model ID:	BP000936.1
Cell line/tissue:	K562
Class:	C2H2 zinc finger factors
Family:	More than 3 adjacent zinc fingers
JASPAR ID:	MA1124.1
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P17028
Source:	ENCSR695EQB
Model:	BPNet
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Sequence logo

Motif name: counts.pos_patterns.pattern_1

Number of seqlets: 4010

Contribution weight matrix (CWM)

A [	-0.00	0.00	0.02	0.00	-0.00	0.00	0.04	0.00	-0.00	0.00	0.05	0.00	-0.00	0.00	0.05	-0.00	0.00	0.00	0.05	-0.00	-0.00	0.00	0.03	-0.00	-0.00	0.00	0.02	-0.00	-0.00	-0.00	0.01	-0.00	-0.00	]
C [	-0.00	0.02	0.00	0.00	-0.00	0.04	0.00	0.00	-0.00	0.05	0.00	0.00	-0.00	0.07	0.00	0.00	-0.00	0.07	0.00	0.00	-0.00	0.05	0.00	0.00	0.00	0.04	0.00	0.00	0.00	0.02	0.00	0.00	0.00	]
G [	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	-0.00	0.00	-0.00	-0.00	-0.00	0.00	-0.00	0.00	-0.00	0.00	-0.00	0.00	-0.00	0.00	0.00	-0.00	-0.00	0.00	0.00	-0.00	0.00	0.00	0.00	-0.00	]
T [	0.01	-0.00	-0.00	0.02	0.04	-0.00	-0.00	0.03	0.06	-0.00	-0.00	0.04	0.07	-0.00	-0.00	0.05	0.07	-0.00	-0.00	0.04	0.07	-0.00	-0.00	0.03	0.05	-0.00	-0.00	0.02	0.02	-0.00	-0.00	0.01	0.01	]

Frequency matrix

A [	1448	870	850	834	1608	765	797	705	1881	579	540	552	2674	385	182	185	3505	140	40	81	3696	51	30	40	3765	35	17	27	3643	33	35	68	3425	135	94	158	3251	513	309	683	2644	879	488	1101	2066	932	594	1319	1537	834	]
C [	843	906	876	1381	739	878	715	1611	662	819	641	2484	496	618	221	3517	215	423	60	3706	119	412	29	3876	86	374	30	3903	136	467	67	3579	212	479	179	3437	248	672	749	2332	373	702	903	1668	559	772	957	1262	732	770	]
G [	732	697	638	647	711	600	609	551	633	484	445	353	397	270	250	128	175	122	68	43	169	66	11	19	128	58	26	6	145	77	44	43	237	130	83	75	237	367	215	238	441	480	352	415	484	584	472	540	594	594	]
T [	987	1537	1646	1148	952	1767	1889	1143	834	2128	2384	621	443	2737	3357	180	115	3325	3842	180	26	3481	3940	75	31	3543	3937	74	86	3433	3864	320	136	3266	3654	340	274	2458	2737	757	552	1949	2267	826	901	1722	1987	889	1147	1812	]

Hypothetical CWM

A [	0.00	0.01	-0.00	-0.01	0.01	0.02	-0.01	-0.02	0.01	0.04	-0.02	-0.02	0.02	0.05	-0.02	-0.03	0.01	0.06	-0.02	-0.03	0.01	0.05	-0.02	-0.02	0.01	0.04	-0.02	-0.02	0.00	0.02	-0.01	-0.01	-0.00	0.01	-0.01	-0.01	]
C [	0.01	0.01	0.01	-0.01	0.02	0.01	0.00	-0.02	0.04	0.01	0.01	-0.03	0.06	0.01	0.01	-0.04	0.07	0.01	0.01	-0.04	0.07	0.01	0.01	-0.03	0.06	0.01	0.01	-0.02	0.05	0.01	0.01	-0.01	0.03	0.01	0.01	0.00	]
G [	0.00	0.01	0.01	0.01	-0.00	0.01	0.01	0.01	-0.02	0.01	0.00	0.01	-0.03	0.01	0.00	0.01	-0.03	0.01	-0.00	0.01	-0.04	0.01	-0.00	0.00	-0.03	0.01	-0.00	0.00	-0.02	0.01	0.00	0.00	-0.01	0.01	0.00	0.00	]
T [	-0.01	-0.01	0.01	0.02	-0.01	-0.02	0.02	0.04	-0.02	-0.03	0.04	0.06	-0.02	-0.04	0.05	0.07	-0.02	-0.04	0.05	0.08	-0.02	-0.04	0.05	0.07	-0.01	-0.03	0.04	0.05	-0.01	-0.02	0.02	0.03	-0.00	-0.01	0.01	0.01	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 7046

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2664

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1698

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1001

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 512

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 379

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 327

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 154

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 61

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_19

Num. of seqlets: 27

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_20

Num. of seqlets: 21

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_21

Num. of seqlets: 21

CWM

PFM

HCWM

8 profiles found for the same TF (ZNF24) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000930.1	ZNF24	ENCSR072PWP	GM12878	Homo sapiens	MA1124.1
BP000931.1	ZNF24	ENCSR099NCH	K562	Homo sapiens	MA1124.1
BP000932.1	ZNF24	ENCSR117WTM	K562	Homo sapiens	MA1124.1
BP000933.1	ZNF24	ENCSR362NWP	HepG2	Homo sapiens	MA1124.1
BP000934.1	ZNF24	ENCSR385AHH	K562	Homo sapiens	MA1124.1
BP000935.1	ZNF24	ENCSR503VTG	MCF-7	Homo sapiens	MA1124.1
BP000937.1	ZNF24	ENCSR791AGT	HepG2	Homo sapiens	MA1124.1
BP000938.1	ZNF24	ENCSR984MDV	HEK293	Homo sapiens	MA1124.1