JASPAR - ZNF24 - BP000935.1

This page shows detailed deep learning-derived predictions and motifs for ZNF24 in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ZNF24
Model ID:	BP000935.1
Cell line/tissue:	MCF-7
Class:	C2H2 zinc finger factors
Family:	More than 3 adjacent zinc fingers
JASPAR ID:	MA1124.1
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P17028
Source:	ENCSR503VTG
Model:	BPNet
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Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 2362

Contribution weight matrix (CWM)

A [	-0.00	0.01	0.01	-0.00	-0.00	0.02	0.01	-0.00	-0.00	0.04	0.02	-0.00	-0.00	0.05	0.03	-0.00	-0.00	0.05	0.02	-0.00	-0.00	0.04	0.02	-0.00	-0.00	0.03	0.01	-0.00	-0.00	0.01	0.00	-0.00	]
C [	0.00	0.00	0.00	0.00	-0.00	0.00	0.00	0.00	-0.00	0.00	0.00	0.00	-0.00	-0.00	0.00	0.00	0.00	-0.00	-0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	]
G [	0.01	0.00	-0.00	0.00	0.02	0.00	-0.00	0.00	0.03	-0.00	-0.00	0.00	0.03	-0.00	-0.00	-0.00	0.04	-0.00	-0.00	-0.00	0.03	-0.00	-0.00	0.00	0.02	-0.00	-0.00	0.00	0.01	-0.00	-0.00	0.00	]
T [	0.00	-0.00	-0.00	0.01	0.00	-0.00	-0.00	0.02	0.00	-0.00	-0.00	0.03	0.00	-0.00	-0.00	0.04	0.00	-0.00	0.00	0.04	0.00	-0.00	0.00	0.03	0.00	-0.00	-0.00	0.01	0.00	-0.00	-0.00	0.01	]

Frequency matrix

A [	614	454	1174	1086	545	420	1328	1199	398	390	1583	1314	180	236	1948	1714	89	134	2278	2008	28	94	2329	2084	10	63	2317	2081	7	60	2287	1942	55	135	2046	1688	165	312	1621	1368	354	513	1234	1130	497	573	1065	943	531	597	]
C [	357	334	346	311	290	252	217	256	230	154	153	199	177	71	91	126	119	33	32	42	82	23	16	31	41	18	18	41	66	47	36	58	131	106	102	131	241	172	250	262	354	285	351	289	405	355	378	399	439	381	]
G [	431	845	489	480	358	1011	550	432	270	1306	461	460	166	1788	257	338	132	2134	40	260	84	2208	13	227	40	2242	19	211	44	2223	23	285	115	1977	139	402	225	1612	284	470	365	1185	419	527	397	940	468	554	459	873	]
T [	960	729	353	485	1169	679	267	475	1464	512	165	389	1839	267	66	184	2022	61	12	52	2168	37	4	20	2271	39	8	29	2245	32	16	77	2061	144	75	141	1731	266	207	262	1289	379	358	416	1063	494	451	466	933	511	]

Hypothetical CWM

A [	0.01	0.00	-0.01	-0.01	0.02	0.01	-0.01	-0.01	0.03	0.02	-0.02	-0.01	0.04	0.02	-0.03	-0.01	0.05	0.03	-0.04	-0.01	0.05	0.03	-0.03	-0.02	0.04	0.02	-0.03	-0.01	0.03	0.01	-0.02	-0.01	0.01	0.01	-0.01	-0.01	0.01	]
C [	0.00	0.00	0.00	-0.00	0.00	0.00	0.00	-0.01	0.00	0.00	0.01	-0.02	0.00	0.00	0.01	-0.02	-0.00	-0.00	0.01	-0.03	-0.00	0.00	0.01	-0.02	0.00	0.00	0.01	-0.01	0.00	0.00	0.01	-0.00	0.01	0.00	0.01	-0.00	0.00	]
G [	-0.00	0.00	0.00	0.01	-0.00	0.00	0.00	0.02	-0.01	0.00	0.00	0.03	-0.02	-0.00	-0.00	0.04	-0.02	-0.00	-0.00	0.04	-0.03	-0.00	-0.00	0.03	-0.02	-0.00	-0.00	0.02	-0.01	-0.00	0.00	0.01	-0.01	0.00	0.00	0.01	-0.00	]
T [	-0.01	-0.01	0.01	0.00	-0.01	-0.01	0.01	0.00	-0.02	-0.01	0.02	0.00	-0.02	-0.01	0.03	0.01	-0.02	-0.02	0.04	0.01	-0.02	-0.01	0.04	0.01	-0.02	-0.01	0.03	0.01	-0.01	-0.01	0.02	0.01	-0.01	-0.00	0.01	0.00	-0.01	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1815

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1582

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1033

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1025

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 341

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 289

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 193

CWM

PFM

HCWM

8 profiles found for the same TF (ZNF24) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000930.1	ZNF24	ENCSR072PWP	GM12878	Homo sapiens	MA1124.1
BP000931.1	ZNF24	ENCSR099NCH	K562	Homo sapiens	MA1124.1
BP000932.1	ZNF24	ENCSR117WTM	K562	Homo sapiens	MA1124.1
BP000933.1	ZNF24	ENCSR362NWP	HepG2	Homo sapiens	MA1124.1
BP000934.1	ZNF24	ENCSR385AHH	K562	Homo sapiens	MA1124.1
BP000936.1	ZNF24	ENCSR695EQB	K562	Homo sapiens	MA1124.1
BP000937.1	ZNF24	ENCSR791AGT	HepG2	Homo sapiens	MA1124.1
BP000938.1	ZNF24	ENCSR984MDV	HEK293	Homo sapiens	MA1124.1