Detailed information of deep learning profile BP000933.1

  1. Home
  2. Deep Learning Profile > BP000933.1
This page shows detailed deep learning-derived predictions and motifs for ZNF24 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZNF24
Model ID: BP000933.1
Cell line/tissue: HepG2
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA1124.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17028  
Source: ENCSR362NWP
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 0.00 0.01 0.00 -0.00 0.00 0.02 0.00 -0.00 0.00 0.03 0.00 0.00 0.00 0.03 0.00 0.00 0.00 0.03 0.00 -0.00 0.00 0.02 0.00 -0.00 0.00 0.01 0.00 -0.00 ]
C [ -0.00 0.01 0.00 -0.00 -0.00 0.01 0.00 -0.00 -0.00 0.03 -0.00 -0.00 -0.00 0.03 -0.00 -0.00 0.00 0.03 0.00 -0.00 0.00 0.02 0.00 -0.00 0.00 0.01 0.00 -0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ 0.01 -0.00 -0.00 0.00 0.02 -0.00 -0.00 0.01 0.03 -0.00 -0.00 0.02 0.05 0.00 -0.00 0.02 0.05 -0.00 -0.00 0.02 0.03 -0.00 -0.00 0.01 0.02 -0.00 -0.00 0.01 0.01 ]

Frequency matrix

       
A [ 640 363 351 403 641 369 355 338 754 289 256 260 995 205 152 177 1348 132 57 45 1616 61 19 20 1640 32 12 59 1521 100 33 134 1425 279 102 351 1186 366 168 469 948 331 224 522 807 321 321 538 692 321 ]
C [ 362 432 387 573 345 400 306 690 325 356 290 921 231 294 166 1285 144 227 52 1590 34 125 6 1628 26 124 10 1545 88 179 110 1469 133 250 282 1069 169 257 319 863 236 290 341 702 258 362 314 617 327 394 ]
G [ 345 291 284 287 366 271 282 259 289 242 309 208 268 210 205 137 163 110 87 52 79 44 18 31 73 22 7 43 102 63 41 40 105 134 115 119 181 187 123 144 206 213 201 204 257 242 302 256 306 270 ]
T [ 405 666 730 489 400 712 809 465 384 865 897 363 258 1043 1229 153 97 1283 1556 65 23 1522 1709 73 13 1574 1723 105 41 1410 1568 109 89 1089 1253 213 216 942 1142 276 362 918 986 324 430 827 815 341 427 767 ]

Hypothetical CWM

   
A [ -0.01 -0.00 0.01 0.00 -0.01 -0.00 0.02 0.00 -0.02 -0.00 0.03 0.00 -0.02 -0.00 0.04 -0.00 -0.02 -0.00 0.03 -0.00 -0.02 -0.00 0.02 0.00 -0.01 0.00 0.01 0.00 -0.01 ]
C [ -0.00 0.01 0.00 -0.00 -0.01 0.02 -0.00 -0.01 -0.01 0.03 -0.01 -0.01 -0.02 0.03 -0.01 -0.01 -0.02 0.03 -0.01 -0.01 -0.01 0.02 -0.00 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 ]
G [ 0.01 0.00 0.00 0.01 0.01 0.00 0.01 0.00 0.00 -0.00 0.01 -0.01 -0.00 -0.01 0.02 -0.01 -0.00 -0.01 0.01 -0.01 -0.00 -0.01 0.01 -0.00 0.00 -0.00 0.01 0.00 0.00 ]
T [ 0.01 -0.00 -0.01 0.00 0.02 -0.01 -0.02 0.01 0.03 -0.01 -0.03 0.02 0.05 -0.01 -0.04 0.03 0.05 -0.01 -0.03 0.02 0.04 -0.01 -0.02 0.01 0.02 -0.01 -0.01 0.01 0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 405

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 216

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 184

CWM

PFM

     

HCWM

8 profiles found for the same TF (ZNF24) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000930.1 ZNF24 ENCSR072PWP GM12878 Homo sapiens MA1124.1
BP000931.1 ZNF24 ENCSR099NCH K562 Homo sapiens MA1124.1
BP000932.1 ZNF24 ENCSR117WTM K562 Homo sapiens MA1124.1
BP000934.1 ZNF24 ENCSR385AHH K562 Homo sapiens MA1124.1
BP000935.1 ZNF24 ENCSR503VTG MCF-7 Homo sapiens MA1124.1
BP000936.1 ZNF24 ENCSR695EQB K562 Homo sapiens MA1124.1
BP000937.1 ZNF24 ENCSR791AGT HepG2 Homo sapiens MA1124.1
BP000938.1 ZNF24 ENCSR984MDV HEK293 Homo sapiens MA1124.1
Showing 8 profiles of page 1 from 1 pages
  • 1 (current)