JASPAR - ZNF24 - BP000932.1

This page shows detailed deep learning-derived predictions and motifs for ZNF24 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ZNF24
Model ID:	BP000932.1
Cell line/tissue:	K562
Class:	C2H2 zinc finger factors
Family:	More than 3 adjacent zinc fingers
JASPAR ID:	MA1124.1
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P17028
Source:	ENCSR117WTM
Model:	BPNet
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Sequence logo

Motif name: counts.pos_patterns.pattern_1

Number of seqlets: 3588

Contribution weight matrix (CWM)

A [	-0.00	0.00	0.01	0.00	-0.00	0.00	0.02	0.00	-0.00	0.00	0.03	0.00	-0.00	0.00	0.04	-0.00	-0.00	0.00	0.03	-0.00	-0.00	0.00	0.02	-0.00	-0.00	-0.00	0.01	-0.00	-0.00	-0.00	]
C [	-0.00	0.01	0.00	-0.00	-0.00	0.02	0.00	-0.00	-0.00	0.04	0.00	-0.00	-0.00	0.05	-0.00	0.00	-0.00	0.05	0.00	0.00	-0.00	0.04	0.00	0.00	0.00	0.03	0.00	0.00	0.00	0.01	]
G [	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	-0.00	0.00	-0.00	0.00	-0.00	0.00	-0.00	0.00	0.00	0.00	-0.00	-0.00	0.00	0.00	0.00	]
T [	0.01	-0.00	-0.00	0.01	0.02	-0.00	-0.00	0.02	0.03	-0.00	-0.00	0.03	0.05	-0.00	-0.00	0.03	0.05	-0.00	-0.00	0.03	0.04	-0.00	-0.00	0.02	0.03	-0.00	0.00	0.01	0.01	-0.00	]

Frequency matrix

A [	682	688	709	1394	622	646	585	1616	523	452	487	2075	366	243	288	2676	198	73	62	3149	60	18	40	3294	19	6	31	3153	28	29	79	2846	226	140	309	2557	527	303	736	2020	707	410	1003	1633	713	554	1085	1327	690	675	]
C [	871	791	1374	712	838	692	1645	719	741	618	2177	591	595	384	2853	444	483	148	3343	247	342	22	3490	193	270	15	3477	242	324	64	3256	386	535	408	2845	438	699	801	1931	535	677	910	1500	621	718	889	1250	785	777	760	]
G [	565	559	533	618	517	498	462	554	422	436	336	422	320	319	187	261	158	162	46	139	91	49	21	80	45	26	11	115	50	63	34	178	208	159	109	230	358	251	273	407	464	331	402	441	530	488	517	532	525	660	]
T [	1470	1550	972	864	1611	1752	896	699	1902	2082	588	500	2307	2642	260	207	2749	3205	137	53	3095	3499	37	21	3254	3541	69	78	3186	3432	219	178	2619	2881	325	363	2004	2233	648	626	1740	1937	683	893	1627	1657	736	944	1596	1493	]

Hypothetical CWM

A [	0.00	0.00	-0.00	-0.01	0.00	0.01	-0.01	-0.01	0.01	0.02	-0.01	-0.01	0.01	0.03	-0.01	-0.02	0.01	0.04	-0.02	-0.02	0.01	0.03	-0.02	-0.02	0.00	0.02	-0.01	-0.01	0.00	0.01	-0.01	-0.01	-0.00	]
C [	0.01	0.00	0.00	-0.01	0.02	0.00	0.00	-0.01	0.03	-0.00	0.00	-0.02	0.04	-0.00	0.00	-0.03	0.05	-0.00	0.01	-0.03	0.05	-0.00	0.01	-0.02	0.04	0.00	0.01	-0.01	0.03	0.00	0.01	-0.00	0.02	]
G [	-0.00	0.00	0.00	0.01	-0.00	0.00	0.00	0.01	-0.01	0.00	0.00	0.01	-0.02	0.01	-0.00	0.00	-0.03	0.01	-0.01	0.00	-0.03	0.01	-0.01	0.00	-0.02	0.00	-0.00	0.00	-0.01	0.00	0.00	0.00	-0.01	]
T [	-0.01	-0.01	0.00	0.01	-0.01	-0.01	0.01	0.02	-0.02	-0.02	0.02	0.04	-0.02	-0.02	0.03	0.05	-0.02	-0.03	0.03	0.05	-0.02	-0.02	0.03	0.04	-0.01	-0.01	0.02	0.03	-0.01	-0.01	0.01	0.01	-0.01	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 3874

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3370

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1533

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 599

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 393

CWM

PFM

HCWM

Motif name: counts.neg_patterns.pattern_0

Num. of seqlets: 358

CWM

PFM

HCWM

Motif name: counts.neg_patterns.pattern_2

Num. of seqlets: 149

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 68

CWM

PFM

HCWM

8 profiles found for the same TF (ZNF24) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000930.1	ZNF24	ENCSR072PWP	GM12878	Homo sapiens	MA1124.1
BP000931.1	ZNF24	ENCSR099NCH	K562	Homo sapiens	MA1124.1
BP000933.1	ZNF24	ENCSR362NWP	HepG2	Homo sapiens	MA1124.1
BP000934.1	ZNF24	ENCSR385AHH	K562	Homo sapiens	MA1124.1
BP000935.1	ZNF24	ENCSR503VTG	MCF-7	Homo sapiens	MA1124.1
BP000936.1	ZNF24	ENCSR695EQB	K562	Homo sapiens	MA1124.1
BP000937.1	ZNF24	ENCSR791AGT	HepG2	Homo sapiens	MA1124.1
BP000938.1	ZNF24	ENCSR984MDV	HEK293	Homo sapiens	MA1124.1