JASPAR - ZNF24 - BP000931.1

This page shows detailed deep learning-derived predictions and motifs for ZNF24 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ZNF24
Model ID:	BP000931.1
Cell line/tissue:	K562
Class:	C2H2 zinc finger factors
Family:	More than 3 adjacent zinc fingers
JASPAR ID:	MA1124.1
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P17028
Source:	ENCSR099NCH
Model:	BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_1

Number of seqlets: 4199

Contribution weight matrix (CWM)

A [	-0.00	0.00	0.02	0.00	-0.00	0.00	0.05	0.00	-0.00	0.00	0.07	-0.00	-0.00	0.00	0.07	0.00	-0.00	0.00	0.07	-0.00	-0.00	0.00	0.05	-0.00	0.00	0.00	0.02	-0.00	-0.00	-0.00	]
C [	-0.00	0.02	0.00	-0.00	-0.00	0.05	0.00	-0.00	-0.00	0.07	0.00	-0.00	-0.00	0.09	0.00	-0.00	-0.00	0.09	0.00	-0.00	-0.00	0.07	0.00	0.00	0.00	0.05	0.00	0.00	0.00	0.02	]
G [	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	-0.00	0.00	-0.00	0.00	-0.00	0.00	-0.00	-0.00	-0.00	0.00	-0.00	0.00	-0.00	0.00	0.00	-0.00	-0.00	0.00	0.00	0.00	-0.00	]
T [	0.02	-0.00	-0.00	0.02	0.04	-0.00	-0.00	0.04	0.07	-0.00	-0.00	0.05	0.09	-0.00	-0.00	0.06	0.10	-0.00	-0.00	0.06	0.09	-0.00	-0.00	0.05	0.06	-0.00	-0.00	0.02	0.03	-0.00	]

Frequency matrix

A [	1550	903	869	869	1674	830	824	815	2035	625	525	624	2818	376	146	161	3893	102	23	75	3864	31	18	49	3952	40	22	17	4048	30	19	81	3839	119	52	140	3526	533	261	786	2810	1040	504	1349	2074	1009	675	1457	1572	863	]
C [	848	944	901	1444	738	872	764	1671	635	848	663	2521	493	602	237	3786	126	400	43	3815	102	398	37	4044	92	352	47	4120	69	351	37	3748	125	338	138	3702	223	633	732	2436	399	661	1042	1530	572	737	970	1237	775	794	]
G [	799	717	720	681	729	625	645	580	675	504	522	382	428	256	226	96	117	95	61	46	211	52	29	28	110	53	46	11	60	56	40	36	189	107	56	59	222	354	237	247	403	525	369	458	533	615	525	610	597	615	]
T [	1002	1635	1709	1205	1058	1872	1966	1133	854	2222	2489	672	460	2965	3590	156	63	3602	4072	263	22	3718	4115	78	45	3754	4084	51	22	3762	4103	334	46	3635	3953	298	228	2679	2969	730	587	1973	2284	862	1020	1838	2029	895	1255	1927	]

Hypothetical CWM

A [	0.00	0.01	-0.00	-0.01	0.01	0.03	-0.00	-0.02	0.02	0.05	-0.02	-0.03	0.02	0.07	-0.02	-0.03	0.02	0.08	-0.02	-0.03	0.01	0.07	-0.03	-0.03	0.01	0.05	-0.02	-0.02	0.00	0.03	-0.01	-0.01	-0.00	0.01	]
C [	0.01	0.01	0.00	-0.01	0.03	0.01	0.00	-0.02	0.06	0.01	0.00	-0.04	0.07	0.01	0.00	-0.05	0.09	0.01	0.00	-0.05	0.09	0.01	0.00	-0.05	0.07	0.01	0.00	-0.03	0.06	0.01	0.01	-0.01	0.03	0.01	]
G [	0.00	0.01	0.01	0.01	-0.00	0.00	0.01	0.02	-0.02	0.01	0.00	0.01	-0.03	0.01	-0.00	0.01	-0.04	0.01	-0.00	0.01	-0.05	0.01	-0.00	0.01	-0.04	0.02	-0.00	0.01	-0.03	0.01	0.00	0.00	-0.01	0.01	]
T [	-0.01	-0.01	0.01	0.02	-0.02	-0.02	0.02	0.04	-0.02	-0.04	0.04	0.07	-0.03	-0.05	0.06	0.09	-0.03	-0.06	0.06	0.10	-0.03	-0.06	0.06	0.09	-0.01	-0.04	0.05	0.06	-0.01	-0.02	0.03	0.03	-0.00	-0.01	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 8622

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1248

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 601

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 207

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 116

CWM

PFM

HCWM

8 profiles found for the same TF (ZNF24) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000930.1	ZNF24	ENCSR072PWP	GM12878	Homo sapiens	MA1124.1
BP000932.1	ZNF24	ENCSR117WTM	K562	Homo sapiens	MA1124.1
BP000933.1	ZNF24	ENCSR362NWP	HepG2	Homo sapiens	MA1124.1
BP000934.1	ZNF24	ENCSR385AHH	K562	Homo sapiens	MA1124.1
BP000935.1	ZNF24	ENCSR503VTG	MCF-7	Homo sapiens	MA1124.1
BP000936.1	ZNF24	ENCSR695EQB	K562	Homo sapiens	MA1124.1
BP000937.1	ZNF24	ENCSR791AGT	HepG2	Homo sapiens	MA1124.1
BP000938.1	ZNF24	ENCSR984MDV	HEK293	Homo sapiens	MA1124.1