JASPAR - TCF7L2 - BP000890.1

This page shows detailed deep learning-derived predictions and motifs for TCF7L2 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	TCF7L2
Model ID:	BP000890.1
Cell line/tissue:	HepG2
Class:	High-mobility group (HMG) domain factors
Family:	TCF-7-related factors
JASPAR ID:	MA0523.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	Q9NQB0
Source:	ENCSR000EVQ
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 2957

Contribution weight matrix (CWM)

A [	-0.00	0.00	0.01	0.02	-0.00	0.03	-0.00	-0.00	0.09	0.08	0.07	-0.00	0.00	-0.00	0.00	]
C [	0.00	0.00	-0.00	-0.00	0.01	-0.00	-0.00	0.04	0.00	-0.00	0.00	0.00	-0.00	0.00	0.00	]
G [	0.00	-0.00	0.00	-0.00	0.02	-0.00	-0.00	-0.00	0.00	-0.00	-0.00	0.05	0.01	0.00	-0.00	]
T [	0.00	-0.00	-0.00	-0.00	-0.00	0.01	0.07	-0.00	0.00	0.00	-0.00	-0.00	-0.00	-0.00	0.00	]

Frequency matrix

A [	846	864	879	853	865	869	874	884	853	877	822	817	844	861	828	820	895	817	917	731	1138	1277	2108	64	1808	171	170	2957	2914	2912	284	733	881	1141	919	741	716	790	783	780	888	833	846	883	841	865	884	861	824	870	]
C [	636	615	618	631	613	595	631	602	630	599	641	707	602	604	617	578	697	681	679	804	623	546	130	1288	23	15	2265	0	12	3	106	516	807	678	662	766	670	661	641	609	617	639	676	626	682	669	654	709	678	654	]
G [	666	716	666	678	695	711	707	685	694	657	717	630	657	690	739	724	664	708	698	694	615	754	413	1494	68	21	450	0	31	30	2560	1412	854	546	624	695	729	731	711	790	712	712	615	650	703	662	648	633	643	581	]
T [	809	762	794	795	784	782	745	786	780	824	777	803	854	802	773	835	701	751	663	728	581	380	306	111	1058	2750	72	0	0	12	7	296	415	592	752	755	842	775	822	778	740	773	820	798	731	761	771	754	812	852	]

Hypothetical CWM

A [	-0.01	0.01	0.01	0.03	-0.04	0.04	-0.01	-0.01	0.09	0.08	0.07	-0.00	0.00	0.00	0.00	-0.00	]
C [	0.01	0.00	-0.01	-0.02	0.03	-0.06	-0.04	0.05	-0.05	-0.03	-0.03	0.01	-0.00	0.01	0.01	0.00	]
G [	0.01	-0.00	0.01	-0.00	0.05	-0.02	-0.05	-0.00	-0.04	-0.02	-0.04	0.06	0.02	0.01	-0.00	0.00	]
T [	-0.00	-0.00	-0.01	-0.02	-0.02	0.02	0.07	-0.03	-0.05	-0.07	-0.03	-0.06	-0.02	-0.00	-0.00	-0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 501

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 336

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 173

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 22

CWM

PFM

HCWM

7 profiles found for the same TF (TCF7L2) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000886.1	TCF7L2	ENCSR000EUV	HCT116	Homo sapiens	MA0523.2
BP000887.1	TCF7L2	ENCSR000EUY	HEK293	Homo sapiens	MA0523.2
BP000888.1	TCF7L2	ENCSR000EVE	HeLa-S3	Homo sapiens	MA0523.2
BP000889.1	TCF7L2	ENCSR000EVF	HeLa-S3	Homo sapiens	MA0523.2
BP000891.1	TCF7L2	ENCSR000EWT	MCF-7	Homo sapiens	MA0523.2
BP000892.1	TCF7L2	ENCSR000EXL	Panc1	Homo sapiens	MA0523.2
BP000893.1	TCF7L2	ENCSR346BOD	HepG2	Homo sapiens	MA0523.2