JASPAR - TCF7L2 - BP000886.1

This page shows detailed deep learning-derived predictions and motifs for TCF7L2 in HCT116 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	TCF7L2
Model ID:	BP000886.1
Cell line/tissue:	HCT116
Class:	High-mobility group (HMG) domain factors
Family:	TCF-7-related factors
JASPAR ID:	MA0523.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	Q9NQB0
Source:	ENCSR000EUV
Model:	BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 8151

Contribution weight matrix (CWM)

A [	-0.00	0.00	0.00	0.02	-0.00	0.04	0.00	-0.00	0.09	0.08	0.07	-0.00	-0.00	0.00	0.00	-0.00	]
C [	0.00	0.00	0.00	-0.00	0.02	-0.00	-0.00	0.06	-0.00	-0.00	0.00	0.00	0.00	0.00	0.00	0.00	]
G [	0.01	0.00	0.00	0.00	0.02	-0.00	-0.00	-0.00	0.00	-0.00	-0.00	0.06	0.02	0.00	0.00	0.00	]
T [	-0.00	-0.00	-0.00	-0.00	-0.00	0.01	0.09	-0.00	0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	0.00	]

Frequency matrix

A [	2095	2110	2081	2130	2147	2109	2142	2028	2057	2074	2014	1995	2106	1896	1943	1965	1951	2367	2922	5404	206	5203	709	341	8095	7724	7746	733	1804	2369	2760	2203	1738	1774	1813	1914	1982	1937	1959	1993	1993	1955	1938	2050	2057	2063	2033	1942	1971	2036	]
C [	2003	2038	2036	2010	2099	2089	2011	2040	2040	2067	2022	2018	1756	2048	2226	2058	2185	2020	1748	496	3707	124	61	6686	5	135	6	441	1554	2406	2007	2103	2310	2144	2193	2290	2094	2012	2109	2030	2064	2138	1970	2029	2050	2045	1996	2080	2076	2070	]
G [	2136	2135	2221	2171	2047	2105	2081	2207	2214	2129	2211	2228	2283	2506	2297	2446	2482	2171	2502	1350	3775	21	7	933	0	284	308	6902	4064	2551	1743	1904	2248	2470	2410	2231	2251	2336	2261	2256	2261	2148	2321	2153	2214	2226	2290	2226	2257	2194	]
T [	1917	1868	1813	1840	1858	1848	1917	1876	1840	1881	1904	1910	2006	1701	1685	1682	1533	1593	979	901	463	2803	7374	191	51	8	91	75	729	825	1641	1941	1855	1763	1735	1716	1824	1866	1822	1872	1833	1910	1922	1919	1830	1817	1832	1903	1847	1851	]

Hypothetical CWM

A [	-0.01	0.00	0.01	0.03	-0.04	0.07	0.01	-0.02	0.09	0.08	0.08	-0.01	-0.00	0.01	0.00	-0.01	-0.01	]
C [	0.02	0.01	0.01	-0.01	0.05	-0.04	-0.03	0.07	-0.05	-0.03	-0.08	0.02	0.02	0.02	0.02	0.02	0.02	]
G [	0.02	0.01	0.01	0.01	0.04	-0.07	-0.08	0.00	-0.04	-0.01	-0.00	0.06	0.04	0.02	0.01	0.01	0.02	]
T [	-0.01	0.00	-0.00	-0.01	-0.02	0.04	0.09	-0.03	-0.01	-0.05	-0.01	-0.06	-0.02	-0.01	-0.00	0.00	-0.01	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 5990

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 711

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 379

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 91

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 20

CWM

PFM

HCWM

7 profiles found for the same TF (TCF7L2) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000887.1	TCF7L2	ENCSR000EUY	HEK293	Homo sapiens	MA0523.2
BP000888.1	TCF7L2	ENCSR000EVE	HeLa-S3	Homo sapiens	MA0523.2
BP000889.1	TCF7L2	ENCSR000EVF	HeLa-S3	Homo sapiens	MA0523.2
BP000890.1	TCF7L2	ENCSR000EVQ	HepG2	Homo sapiens	MA0523.2
BP000891.1	TCF7L2	ENCSR000EWT	MCF-7	Homo sapiens	MA0523.2
BP000892.1	TCF7L2	ENCSR000EXL	Panc1	Homo sapiens	MA0523.2
BP000893.1	TCF7L2	ENCSR346BOD	HepG2	Homo sapiens	MA0523.2