JASPAR - TCF7L2 - BP000888.1

This page shows detailed deep learning-derived predictions and motifs for TCF7L2 in HeLa-S3 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	TCF7L2
Model ID:	BP000888.1
Cell line/tissue:	HeLa-S3
Class:	High-mobility group (HMG) domain factors
Family:	TCF-7-related factors
JASPAR ID:	MA0523.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	Q9NQB0
Source:	ENCSR000EVE
Model:	BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 5371

Contribution weight matrix (CWM)

A [	0.00	-0.00	-0.00	-0.00	-0.00	-0.00	0.00	0.00	-0.00	0.08	0.01	0.00	-0.00	-0.00	-0.00	]
C [	0.00	0.00	0.00	0.01	0.04	-0.00	0.00	-0.00	-0.00	-0.00	-0.00	0.02	-0.00	0.00	0.01	]
G [	0.00	0.00	0.00	0.00	0.00	0.00	-0.00	-0.00	0.04	-0.00	-0.00	0.01	-0.00	0.00	0.00	]
T [	-0.00	0.00	0.00	-0.00	-0.00	0.06	0.06	0.08	0.00	0.00	0.04	-0.00	0.02	0.00	-0.00	]

Frequency matrix

A [	1290	1269	1281	1334	1275	1260	1250	1264	1295	1232	1160	1155	1208	1195	1217	1414	1155	555	454	64	40	7	25	71	5164	1853	308	594	616	1073	1068	1155	1122	1145	1317	1295	1261	1287	1224	1244	1299	1306	1254	1244	1222	1294	1259	1292	1356	1293	]
C [	1385	1378	1427	1358	1454	1417	1460	1438	1445	1452	1432	1438	1612	1552	1429	1213	994	1661	2663	4591	125	190	1	599	1	26	2596	788	1635	1403	1622	1592	1531	1688	1524	1410	1388	1375	1376	1391	1350	1296	1337	1389	1417	1311	1409	1358	1327	1297	]
G [	1309	1318	1327	1300	1334	1412	1286	1332	1320	1306	1400	1496	1428	1375	1515	1256	1314	1487	1075	272	10	31	8	4343	18	84	2344	279	1083	1280	1413	1344	1475	1273	1145	1349	1363	1294	1424	1369	1306	1409	1360	1280	1337	1356	1306	1365	1238	1406	]
T [	1387	1406	1336	1379	1308	1282	1375	1337	1311	1381	1379	1282	1123	1249	1210	1488	1908	1668	1179	444	5196	5143	5337	358	188	3408	123	3710	2037	1615	1268	1280	1243	1265	1385	1317	1359	1415	1347	1367	1416	1360	1420	1458	1395	1410	1397	1356	1450	1375	]

Hypothetical CWM

A [	-0.01	0.00	-0.00	-0.01	-0.02	-0.03	-0.01	-0.03	-0.01	-0.02	0.08	0.02	-0.00	0.00	-0.00	0.00	0.00	]
C [	0.01	0.00	0.00	0.02	0.03	0.04	-0.00	-0.00	-0.04	-0.00	-0.06	-0.03	0.03	0.00	0.01	0.00	0.01	]
G [	0.01	0.01	0.01	0.01	0.01	0.01	-0.03	-0.02	-0.03	0.05	-0.03	-0.04	0.03	-0.01	0.01	0.01	0.01	]
T [	-0.01	-0.00	0.01	0.00	0.00	0.00	0.06	0.07	0.08	-0.00	0.01	0.05	-0.03	0.03	0.01	0.00	-0.01	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 4434

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1886

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1228

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 381

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 221

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 148

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 143

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 94

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 36

CWM

PFM

HCWM

7 profiles found for the same TF (TCF7L2) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000886.1	TCF7L2	ENCSR000EUV	HCT116	Homo sapiens	MA0523.2
BP000887.1	TCF7L2	ENCSR000EUY	HEK293	Homo sapiens	MA0523.2
BP000889.1	TCF7L2	ENCSR000EVF	HeLa-S3	Homo sapiens	MA0523.2
BP000890.1	TCF7L2	ENCSR000EVQ	HepG2	Homo sapiens	MA0523.2
BP000891.1	TCF7L2	ENCSR000EWT	MCF-7	Homo sapiens	MA0523.2
BP000892.1	TCF7L2	ENCSR000EXL	Panc1	Homo sapiens	MA0523.2
BP000893.1	TCF7L2	ENCSR346BOD	HepG2	Homo sapiens	MA0523.2