Detailed information of deep learning profile BP000893.1

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This page shows detailed deep learning-derived predictions and motifs for TCF7L2 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: TCF7L2
Model ID: BP000893.1
Cell line/tissue: HepG2
Class: High-mobility group (HMG) domain factors
Family: TCF-7-related factors
JASPAR ID: MA0523.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q9NQB0  
Source: ENCSR346BOD
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 0.05 0.01 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.01 0.04 -0.00 -0.00 0.00 -0.00 -0.00 0.00 0.02 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 0.04 -0.00 -0.00 0.01 -0.00 0.00 0.00 0.00 ]
T [ 0.00 0.00 -0.00 0.00 0.00 0.05 0.05 0.07 -0.00 0.00 0.02 -0.00 0.01 0.00 0.00 -0.00 ]

Frequency matrix

       
A [ 2100 2091 2178 2101 2043 2030 2129 2079 2087 2147 2102 2123 2036 2058 2143 2038 2011 1902 1959 1867 1192 847 87 199 15 15 177 7813 3078 421 1047 1010 1775 1815 1846 1942 1907 2057 2024 2069 2233 2114 2056 2121 2082 2163 2058 2089 2149 2217 ]
C [ 2218 2241 2089 2110 2277 2288 2063 2189 2130 2246 2152 2139 2308 2447 2166 2452 2662 2174 1838 1700 2650 3951 7209 106 199 5 936 18 170 4720 1447 2671 2160 2255 2424 2398 2226 2285 2205 2142 2110 2071 2129 2223 2080 2073 2171 2253 2109 2042 ]
G [ 2104 1986 2093 2110 2085 2058 1989 2123 2176 1953 2029 2176 2027 2034 2280 2192 2023 2479 2223 2237 2341 1619 496 13 59 3 7092 55 136 3223 381 1723 1781 2469 2235 2244 2086 1933 1981 1922 2066 2140 2163 1893 1978 2039 2075 1886 1980 2036 ]
T [ 2151 2255 2213 2252 2168 2197 2392 2182 2180 2227 2290 2135 2202 2034 1984 1891 1877 2018 2553 2769 2390 2156 781 8255 8300 8550 368 687 5189 209 5698 3169 2857 2034 2068 1989 2354 2298 2363 2440 2164 2248 2225 2336 2433 2298 2269 2345 2335 2278 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 -0.01 -0.03 -0.00 -0.03 -0.02 -0.01 0.05 0.02 -0.01 -0.01 -0.01 -0.00 -0.00 ]
C [ 0.00 0.00 0.01 0.02 0.04 -0.01 -0.00 -0.02 -0.01 -0.04 -0.01 0.04 0.01 0.01 0.01 0.01 ]
G [ 0.01 0.02 0.01 0.01 0.01 -0.04 -0.02 -0.04 0.05 -0.01 -0.02 0.02 -0.01 0.00 0.01 0.01 ]
T [ 0.00 0.00 0.00 0.00 -0.00 0.05 0.05 0.07 -0.01 0.00 0.03 -0.02 0.02 0.01 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 6799

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 5548

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 5051

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 3049

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 2033

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 1697

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 1390

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 1369

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 824

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 446

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 268

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 247

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 155

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 105

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 101

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_17

Num. of seqlets: 24

CWM

PFM

     

HCWM

7 profiles found for the same TF (TCF7L2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000886.1 TCF7L2 ENCSR000EUV HCT116 Homo sapiens MA0523.2
BP000887.1 TCF7L2 ENCSR000EUY HEK293 Homo sapiens MA0523.2
BP000888.1 TCF7L2 ENCSR000EVE HeLa-S3 Homo sapiens MA0523.2
BP000889.1 TCF7L2 ENCSR000EVF HeLa-S3 Homo sapiens MA0523.2
BP000890.1 TCF7L2 ENCSR000EVQ HepG2 Homo sapiens MA0523.2
BP000891.1 TCF7L2 ENCSR000EWT MCF-7 Homo sapiens MA0523.2
BP000892.1 TCF7L2 ENCSR000EXL Panc1 Homo sapiens MA0523.2
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