JASPAR - TCF7L2 - BP000889.1

This page shows detailed deep learning-derived predictions and motifs for TCF7L2 in HeLa-S3 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	TCF7L2
Model ID:	BP000889.1
Cell line/tissue:	HeLa-S3
Class:	High-mobility group (HMG) domain factors
Family:	TCF-7-related factors
JASPAR ID:	MA0523.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	Q9NQB0
Source:	ENCSR000EVF
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 2556

Contribution weight matrix (CWM)

A [	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	0.00	-0.00	0.07	0.01	-0.00	-0.00	0.00	0.00	-0.00	]
C [	0.00	0.00	0.00	0.01	0.04	-0.00	-0.00	0.00	0.00	-0.00	-0.00	0.01	-0.00	0.00	0.00	0.01	]
G [	0.00	0.00	0.00	0.00	0.00	-0.00	-0.00	-0.00	0.04	-0.00	-0.00	0.01	-0.00	-0.00	0.00	0.00	]
T [	-0.00	0.00	0.00	-0.00	-0.00	0.05	0.06	0.07	-0.00	0.00	0.03	-0.00	0.02	0.00	-0.00	-0.00	]

Frequency matrix

A [	625	586	599	638	607	603	584	677	633	613	649	615	649	568	564	496	541	554	586	643	562	288	244	23	21	14	17	44	2414	938	161	323	335	542	502	545	548	529	651	600	598	596	631	579	598	599	598	608	541	598	]
C [	623	635	644	647	647	651	685	644	677	680	654	671	659	680	671	683	744	776	695	600	510	748	1246	2227	58	41	1	357	2	23	1140	405	754	636	783	755	673	763	711	632	653	685	622	660	666	610	659	631	678	600	]
G [	648	640	627	614	612	616	622	586	601	601	605	609	602	666	662	722	672	656	737	622	569	721	529	120	4	15	3	2066	16	46	1180	170	513	613	674	600	728	641	533	643	614	577	657	631	583	635	622	555	616	632	]
T [	660	695	686	657	690	686	665	649	645	662	648	661	646	642	659	655	599	570	538	691	915	799	537	186	2473	2486	2535	89	124	1549	75	1658	954	765	597	656	607	623	661	681	691	698	646	686	709	712	677	762	721	726	]

Hypothetical CWM

A [	-0.00	-0.00	-0.00	-0.01	-0.02	-0.03	-0.01	-0.02	-0.01	-0.03	0.07	0.03	-0.01	-0.01	-0.00	0.00	-0.01	]
C [	0.01	0.00	0.00	0.01	0.02	0.04	-0.01	-0.02	-0.04	0.01	-0.06	-0.03	0.02	0.00	0.00	0.00	0.02	]
G [	0.01	0.01	0.00	0.01	0.01	0.01	-0.03	-0.03	-0.04	0.05	-0.03	-0.04	0.03	-0.01	0.00	0.01	0.01	]
T [	-0.01	-0.00	0.00	0.00	-0.00	-0.01	0.05	0.06	0.07	-0.02	0.00	0.04	-0.03	0.02	0.01	-0.00	-0.01	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1036

CWM

PFM

HCWM

7 profiles found for the same TF (TCF7L2) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000886.1	TCF7L2	ENCSR000EUV	HCT116	Homo sapiens	MA0523.2
BP000887.1	TCF7L2	ENCSR000EUY	HEK293	Homo sapiens	MA0523.2
BP000888.1	TCF7L2	ENCSR000EVE	HeLa-S3	Homo sapiens	MA0523.2
BP000890.1	TCF7L2	ENCSR000EVQ	HepG2	Homo sapiens	MA0523.2
BP000891.1	TCF7L2	ENCSR000EWT	MCF-7	Homo sapiens	MA0523.2
BP000892.1	TCF7L2	ENCSR000EXL	Panc1	Homo sapiens	MA0523.2
BP000893.1	TCF7L2	ENCSR346BOD	HepG2	Homo sapiens	MA0523.2