JASPAR - TCF7L2 - BP000891.1

This page shows detailed deep learning-derived predictions and motifs for TCF7L2 in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	TCF7L2
Model ID:	BP000891.1
Cell line/tissue:	MCF-7
Class:	High-mobility group (HMG) domain factors
Family:	TCF-7-related factors
JASPAR ID:	MA0523.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	Q9NQB0
Source:	ENCSR000EWT
Model:	BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 3820

Contribution weight matrix (CWM)

A [	0.00	-0.00	-0.00	-0.00	0.00	0.00	-0.00	0.00	-0.00	0.07	0.01	-0.00	0.00	-0.00	0.00	-0.00	-0.00	]
C [	0.00	0.00	0.00	0.01	0.04	-0.00	-0.00	0.00	-0.00	-0.00	-0.00	0.02	-0.00	0.00	-0.00	0.01	0.00	]
G [	0.00	0.00	0.00	0.00	0.00	0.00	-0.00	-0.00	0.04	-0.00	-0.00	0.01	-0.00	0.00	0.00	0.00	0.00	]
T [	-0.00	0.00	0.00	0.00	-0.00	0.06	0.06	0.07	-0.00	0.00	0.04	-0.00	0.02	0.00	0.00	-0.00	0.00	]

Frequency matrix

A [	938	940	983	985	920	917	908	967	959	912	892	929	859	880	896	971	835	481	309	58	6	8	34	60	3657	1192	150	473	499	844	773	811	824	849	1006	868	936	940	929	1004	942	948	981	944	944	942	971	918	958	903	]
C [	938	954	941	902	952	930	1009	992	981	932	971	952	1144	1043	945	826	736	1097	1820	3226	59	103	1	466	2	1	1910	538	1083	898	1126	1166	1043	1052	958	999	963	897	901	880	949	909	901	915	914	880	905	1002	939	920	]
G [	890	887	895	912	946	952	864	890	867	917	954	1001	971	950	1050	914	824	1056	745	236	3	23	5	3126	16	37	1701	162	789	871	1005	889	1023	884	790	924	852	924	1012	988	879	928	884	913	882	939	928	852	860	922	]
T [	1054	1039	1001	1021	1002	1021	1039	971	1013	1059	1003	938	846	947	929	1109	1425	1186	946	300	3752	3686	3780	168	145	2590	59	2647	1449	1207	916	954	930	1035	1066	1029	1069	1059	978	948	1050	1035	1054	1048	1080	1059	1016	1048	1063	1075	]

Hypothetical CWM

A [	-0.00	0.00	0.00	-0.00	-0.01	-0.03	-0.03	-0.03	0.00	-0.02	0.08	0.02	-0.01	0.00	0.00	0.01	-0.00	]
C [	0.01	0.01	0.01	0.02	0.02	0.04	-0.00	0.00	-0.03	0.01	-0.06	-0.04	0.04	-0.00	0.01	0.00	0.02	]
G [	0.02	0.01	0.01	0.01	0.01	0.01	-0.03	-0.02	-0.04	0.05	-0.02	-0.04	0.03	-0.01	0.01	0.01	0.01	]
T [	-0.01	-0.00	0.01	0.01	0.01	-0.00	0.06	0.06	0.07	-0.00	0.00	0.05	-0.03	0.03	0.01	0.00	-0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 949

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 826

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 550

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 491

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 247

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 244

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 208

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 167

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 72

CWM

PFM

HCWM

7 profiles found for the same TF (TCF7L2) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000886.1	TCF7L2	ENCSR000EUV	HCT116	Homo sapiens	MA0523.2
BP000887.1	TCF7L2	ENCSR000EUY	HEK293	Homo sapiens	MA0523.2
BP000888.1	TCF7L2	ENCSR000EVE	HeLa-S3	Homo sapiens	MA0523.2
BP000889.1	TCF7L2	ENCSR000EVF	HeLa-S3	Homo sapiens	MA0523.2
BP000890.1	TCF7L2	ENCSR000EVQ	HepG2	Homo sapiens	MA0523.2
BP000892.1	TCF7L2	ENCSR000EXL	Panc1	Homo sapiens	MA0523.2
BP000893.1	TCF7L2	ENCSR346BOD	HepG2	Homo sapiens	MA0523.2