JASPAR - TCF7L2 - BP000890.1

This page shows detailed deep learning-derived predictions and motifs for TCF7L2 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	TCF7L2
Model ID:	BP000890.1
Cell line/tissue:	HepG2
Class:	High-mobility group (HMG) domain factors
Family:	TCF-7-related factors
JASPAR ID:	MA0523.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	Q9NQB0
Source:	ENCSR000EVQ
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 2957

Contribution weight matrix (CWM)

A [	0.00	-0.00	-0.00	-0.00	-0.00	0.00	0.00	-0.00	0.07	0.01	-0.00	-0.00	-0.00	-0.00	0.00	]
C [	-0.00	0.00	0.01	0.05	-0.00	-0.00	0.00	-0.00	-0.00	-0.00	0.02	-0.00	0.00	-0.00	0.00	]
G [	0.00	0.00	-0.00	0.00	0.00	-0.00	0.00	0.04	-0.00	-0.00	0.01	-0.00	-0.00	0.00	0.00	]
T [	0.00	-0.00	0.00	-0.00	0.07	0.08	0.09	-0.00	-0.00	0.03	-0.00	0.02	0.01	0.00	-0.00	]

Frequency matrix

A [	852	812	754	771	761	731	798	820	773	740	778	822	775	842	755	752	592	415	296	7	12	0	0	72	2750	1058	111	306	380	581	728	663	751	701	835	773	802	854	803	777	824	780	786	745	782	784	795	794	762	809	]
C [	581	643	633	648	662	703	650	615	712	712	790	711	731	729	695	624	546	854	1412	2560	30	31	0	450	21	68	1494	413	754	615	694	698	708	664	724	739	690	657	630	717	657	694	685	707	711	695	678	666	716	666	]
G [	654	678	709	654	669	682	626	676	639	617	609	641	661	670	766	662	678	807	516	106	3	12	0	2265	15	23	1288	130	546	623	804	679	681	697	578	617	604	602	707	641	599	630	602	631	595	613	631	618	615	636	]
T [	870	824	861	884	865	841	883	846	833	888	780	783	790	716	741	919	1141	881	733	284	2912	2914	2957	170	171	1808	64	2108	1277	1138	731	917	817	895	820	828	861	844	817	822	877	853	884	874	869	865	853	879	864	846	]

Hypothetical CWM

A [	-0.00	-0.00	-0.00	-0.02	-0.06	-0.03	-0.07	-0.05	-0.03	0.07	0.02	-0.02	-0.02	-0.01	-0.00	-0.00	]
C [	0.00	-0.00	0.01	0.02	0.06	-0.04	-0.02	-0.04	-0.00	-0.05	-0.02	0.05	-0.00	0.01	-0.00	0.01	]
G [	0.00	0.01	0.01	-0.00	0.01	-0.03	-0.03	-0.05	0.05	-0.04	-0.06	0.03	-0.02	-0.01	0.00	0.01	]
T [	-0.00	0.00	0.00	0.00	-0.00	0.07	0.08	0.09	-0.01	-0.01	0.04	-0.04	0.03	0.01	0.01	-0.01	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 501

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 336

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 173

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 22

CWM

PFM

HCWM

7 profiles found for the same TF (TCF7L2) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000886.1	TCF7L2	ENCSR000EUV	HCT116	Homo sapiens	MA0523.2
BP000887.1	TCF7L2	ENCSR000EUY	HEK293	Homo sapiens	MA0523.2
BP000888.1	TCF7L2	ENCSR000EVE	HeLa-S3	Homo sapiens	MA0523.2
BP000889.1	TCF7L2	ENCSR000EVF	HeLa-S3	Homo sapiens	MA0523.2
BP000891.1	TCF7L2	ENCSR000EWT	MCF-7	Homo sapiens	MA0523.2
BP000892.1	TCF7L2	ENCSR000EXL	Panc1	Homo sapiens	MA0523.2
BP000893.1	TCF7L2	ENCSR346BOD	HepG2	Homo sapiens	MA0523.2