JASPAR - TCF7L2 - BP000887.1

This page shows detailed deep learning-derived predictions and motifs for TCF7L2 in HEK293 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	TCF7L2
Model ID:	BP000887.1
Cell line/tissue:	HEK293
Class:	High-mobility group (HMG) domain factors
Family:	TCF-7-related factors
JASPAR ID:	MA0523.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	Q9NQB0
Source:	ENCSR000EUY
Model:	BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 4085

Contribution weight matrix (CWM)

A [	0.00	0.02	-0.00	0.03	0.00	0.00	0.07	0.06	0.05	-0.00	-0.00	-0.00	-0.00	-0.00	]
C [	0.00	-0.00	0.01	-0.00	-0.00	0.02	-0.00	-0.00	0.00	0.00	0.00	0.00	0.00	0.00	]
G [	0.00	-0.00	0.01	-0.00	0.00	-0.00	-0.00	-0.00	-0.00	0.03	0.01	0.00	0.00	0.00	]
T [	-0.00	0.00	0.00	0.01	0.06	0.00	0.00	0.00	-0.00	0.00	-0.00	-0.00	0.00	0.00	]

Frequency matrix

A [	1082	1117	1130	1183	1129	1148	1125	1086	1074	1073	1147	1166	1089	1165	1126	1049	1083	1038	1297	1457	2858	72	2501	161	150	4067	4013	4028	300	878	1144	1389	1107	898	911	1037	1001	1094	1101	1052	1098	1078	1045	1048	1097	1064	1136	1133	1101	1108	]
C [	964	942	947	893	906	931	909	941	966	961	936	906	956	888	961	1001	918	1084	935	966	184	1899	24	10	3155	1	11	3	149	789	1225	990	1029	1139	1015	1033	1047	967	929	992	934	935	1037	966	958	961	951	900	969	898	]
G [	984	995	938	979	1005	934	982	1054	989	1035	1008	994	1040	995	1005	1004	1153	1078	1030	1190	539	1852	5	0	617	2	57	46	3614	2064	1310	855	867	1012	1139	1025	964	1006	1052	1043	980	1046	976	1061	996	1003	1018	949	1018	1032	]
T [	1055	1031	1070	1030	1045	1072	1069	1004	1056	1016	994	1019	1000	1037	993	1031	931	885	823	472	504	262	1555	3914	163	15	4	8	22	354	406	851	1082	1036	1020	990	1073	1018	1003	998	1073	1026	1027	1010	1034	1057	980	1103	997	1047	]

Hypothetical CWM

A [	0.00	0.01	0.02	-0.02	0.04	0.01	0.01	0.07	0.06	0.05	0.00	-0.00	-0.00	-0.00	-0.00	]
C [	0.01	0.00	-0.01	0.02	-0.03	-0.03	0.02	-0.06	-0.03	-0.03	0.00	0.01	0.01	0.01	0.01	]
G [	0.01	0.01	-0.01	0.02	-0.04	-0.06	-0.01	-0.03	-0.01	-0.01	0.04	0.02	0.01	0.00	0.01	]
T [	-0.00	-0.00	0.00	-0.01	0.03	0.07	0.00	-0.00	-0.03	-0.02	-0.03	-0.01	-0.01	0.00	-0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2431

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 228

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 148

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 145

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 111

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 106

CWM

PFM

HCWM

7 profiles found for the same TF (TCF7L2) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000886.1	TCF7L2	ENCSR000EUV	HCT116	Homo sapiens	MA0523.2
BP000888.1	TCF7L2	ENCSR000EVE	HeLa-S3	Homo sapiens	MA0523.2
BP000889.1	TCF7L2	ENCSR000EVF	HeLa-S3	Homo sapiens	MA0523.2
BP000890.1	TCF7L2	ENCSR000EVQ	HepG2	Homo sapiens	MA0523.2
BP000891.1	TCF7L2	ENCSR000EWT	MCF-7	Homo sapiens	MA0523.2
BP000892.1	TCF7L2	ENCSR000EXL	Panc1	Homo sapiens	MA0523.2
BP000893.1	TCF7L2	ENCSR346BOD	HepG2	Homo sapiens	MA0523.2