JASPAR - ESRRA - BP000824.1

This page shows detailed deep learning-derived predictions and motifs for ESRRA in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ESRRA
Model ID:	BP000824.1
Cell line/tissue:	MCF-7
Class:	Nuclear receptors with C4 zinc fingers
Family:	Steroid hormone receptors (NR3)
JASPAR ID:	MA0592.4
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P11474
Source:	ENCSR954WVZ
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 7855

Contribution weight matrix (CWM)

A [	0.00	0.00	-0.00	0.00	-0.00	0.00	0.02	-0.00	-0.00	-0.00	-0.00	-0.00	0.00	0.00	-0.00	]
C [	0.00	0.00	0.00	-0.00	0.00	0.00	0.00	0.04	0.03	0.00	0.00	-0.00	0.00	0.00	0.00	]
G [	0.00	0.00	0.00	0.00	-0.00	0.02	-0.00	0.00	0.00	0.00	-0.00	0.01	0.00	0.00	0.00	]
T [	-0.00	-0.00	-0.00	0.00	0.03	-0.00	-0.00	-0.00	-0.00	0.03	0.01	-0.00	-0.00	-0.00	-0.00	]

Frequency matrix

A [	1744	1734	1832	1811	1683	1664	1676	1753	1760	1788	1827	1712	1765	1673	1939	1981	1407	1655	1627	1222	2327	1959	1465	1572	46	421	6333	14	176	8	496	868	2751	1950	1723	2083	2043	1782	1753	1642	1878	1696	1651	1665	1940	1950	1648	1673	1690	1706	]
C [	2189	2122	2018	2159	2121	2327	2158	2143	2276	2299	2198	2258	1999	2184	2027	2202	2060	1927	1823	3172	1788	2281	1922	1757	593	513	1014	7835	7549	607	1549	1491	1329	1926	2580	1960	1933	2046	2143	2367	2208	2400	2026	2015	2088	2128	2353	2250	2137	2287	]
G [	1964	2078	2153	1992	2020	1875	1931	2085	1963	1894	1907	1985	2013	1922	2018	1985	2345	2646	2034	1636	1809	2257	2027	3122	25	6912	56	3	13	34	631	3870	2802	2709	1854	1925	2144	2129	1815	1962	1854	1738	1875	1992	1883	1883	1963	1955	1812	1929	]
T [	1958	1921	1852	1893	2031	1989	2090	1874	1856	1874	1923	1900	2078	2076	1871	1687	2043	1627	2371	1825	1931	1358	2441	1404	7191	9	452	3	117	7206	5179	1626	973	1270	1698	1887	1735	1898	2144	1884	1915	2021	2303	2183	1944	1894	1891	1977	2216	1933	]

Hypothetical CWM

A [	0.00	0.00	-0.00	-0.00	-0.03	0.00	0.02	-0.01	-0.01	-0.04	-0.01	-0.01	0.01	0.00	-0.00	]
C [	-0.00	0.00	0.00	-0.01	0.01	-0.00	0.00	0.04	0.03	0.00	0.00	0.00	-0.00	0.00	0.00	]
G [	0.00	0.00	0.01	0.01	-0.03	0.03	-0.02	-0.02	-0.01	-0.00	-0.01	0.01	0.00	0.00	0.00	]
T [	-0.01	-0.01	-0.00	0.00	0.03	-0.03	-0.01	-0.02	-0.01	0.03	0.01	-0.00	-0.01	-0.01	-0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1667

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1053

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 953

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 97

CWM

PFM

HCWM

6 profiles found for the same TF (ESRRA) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000818.1	ESRRA	ENCSR000DYQ	GM12878	Homo sapiens	MA0592.4
BP000819.1	ESRRA	ENCSR000EEW	HepG2	Homo sapiens	MA0592.4
BP000820.1	ESRRA	ENCSR029OPK	WTC11	Homo sapiens	MA0592.4
BP000821.1	ESRRA	ENCSR267NVP	HepG2	Homo sapiens	MA0592.4
BP000822.1	ESRRA	ENCSR473SUA	A549	Homo sapiens	MA0592.4
BP000823.1	ESRRA	ENCSR486IFJ	K562	Homo sapiens	MA0592.4