Detailed information of deep learning profile BP000819.1

This page shows detailed deep learning-derived predictions and motifs for ESRRA in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ESRRA
Model ID: BP000819.1
Cell line/tissue: HepG2
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
JASPAR ID: MA0592.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P11474  
Source: ENCSR000EEW
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ 0.00 0.00 -0.00 -0.00 -0.00 0.00 0.02 0.00 -0.00 0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 ]
C [ 0.00 0.00 -0.00 -0.00 0.00 -0.00 0.00 0.03 0.02 -0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.03 -0.00 -0.00 0.00 -0.00 -0.00 0.01 0.00 0.00 -0.00 0.00 ]
T [ -0.00 -0.00 0.00 0.00 0.02 -0.00 -0.00 -0.00 -0.00 0.03 0.02 0.00 -0.00 -0.00 -0.00 0.00 ]

Frequency matrix

A [ 211 191 205 195 188 190 212 193 201 197 209 237 182 231 202 172 198 206 172 242 215 201 164 14 26 841 42 12 3 17 32 278 189 222 225 199 187 175 186 225 188 169 178 206 207 199 183 180 196 201 ]
C [ 292 297 294 298 292 291 312 315 318 316 325 267 296 279 314 316 310 275 387 288 351 201 220 60 16 97 947 965 42 125 112 104 286 415 339 314 298 298 318 303 355 317 294 317 296 347 316 294 336 314 ]
G [ 266 287 253 281 275 277 272 260 242 245 244 253 295 277 227 266 285 314 273 213 293 279 445 21 954 18 3 4 4 13 574 524 399 164 168 267 285 271 286 261 249 216 280 252 254 230 257 280 247 241 ]
T [ 228 222 245 223 242 239 201 229 236 239 219 240 224 210 254 243 204 202 165 254 138 316 168 902 1 41 5 16 948 842 279 91 123 196 265 217 227 253 207 208 205 295 245 222 240 221 241 243 218 241 ]

Hypothetical CWM

A [ 0.00 -0.00 -0.00 -0.01 -0.02 -0.00 0.02 -0.00 -0.02 -0.02 -0.01 -0.01 0.00 -0.00 -0.00 -0.01 ]
C [ 0.00 0.00 -0.00 -0.01 0.00 -0.02 -0.00 0.03 0.02 -0.01 -0.00 -0.01 -0.00 0.00 0.01 0.01 ]
G [ -0.00 0.00 0.00 0.00 -0.01 0.03 -0.02 -0.02 -0.01 -0.01 -0.02 0.01 0.01 0.00 -0.01 -0.00 ]
T [ -0.01 -0.01 -0.00 0.00 0.02 -0.02 -0.01 -0.02 -0.02 0.03 0.02 0.00 -0.01 -0.01 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 376

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 23

6 profiles found for the same TF (ESRRA) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000818.1 ESRRA ENCSR000DYQ GM12878 Homo sapiens MA0592.4
BP000820.1 ESRRA ENCSR029OPK WTC11 Homo sapiens MA0592.4
BP000821.1 ESRRA ENCSR267NVP HepG2 Homo sapiens MA0592.4
BP000822.1 ESRRA ENCSR473SUA A549 Homo sapiens MA0592.4
BP000823.1 ESRRA ENCSR486IFJ K562 Homo sapiens MA0592.4
BP000824.1 ESRRA ENCSR954WVZ MCF-7 Homo sapiens MA0592.4
Showing 6 profiles of page 1 from 1 pages
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