JASPAR - ESRRA - BP000821.1

This page shows detailed deep learning-derived predictions and motifs for ESRRA in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ESRRA
Model ID:	BP000821.1
Cell line/tissue:	HepG2
Class:	Nuclear receptors with C4 zinc fingers
Family:	Steroid hormone receptors (NR3)
JASPAR ID:	MA0592.4
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P11474
Source:	ENCSR267NVP
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 7586

Contribution weight matrix (CWM)

A [	0.00	-0.00	-0.00	-0.00	0.00	0.03	0.04	0.00	-0.00	-0.00	-0.00	0.02	0.00	0.00	-0.00	-0.00	]
C [	0.00	0.00	0.00	0.01	0.01	-0.00	0.00	0.00	-0.00	-0.00	0.03	0.00	0.00	0.00	0.00	0.00	]
G [	0.01	0.01	0.00	-0.00	0.00	0.00	-0.00	0.04	0.04	-0.00	-0.00	0.00	-0.00	0.00	0.00	0.00	]
T [	-0.00	0.00	0.00	0.00	-0.00	-0.00	-0.00	-0.00	0.00	0.02	0.00	-0.00	-0.00	-0.00	0.00	0.00	]

Frequency matrix

A [	1798	1972	1921	2012	1929	2068	1917	1881	1768	1770	2053	2118	1889	1698	1749	2159	2049	2078	1972	1293	1109	760	2435	6444	7231	41	10	530	21	6656	1605	2563	1351	1886	1573	1906	1824	2069	2015	1824	1992	2061	1938	1883	1848	1899	1830	2025	1922	1983	]
C [	2014	1892	1845	1907	1862	1810	1893	1813	1891	1800	1853	1698	1804	2039	2190	2096	2097	1549	1039	1215	2288	3556	3864	96	4	7	4	385	6931	185	2579	1766	1930	1775	1887	2087	1989	1783	1691	1958	1846	1747	1822	1810	1815	1786	2014	1887	1905	1913	]
G [	2090	2120	2183	1999	2161	2079	2171	2239	2081	2131	2015	2267	2332	2071	2051	1841	1973	2430	2864	3349	2282	758	1018	942	340	7521	7532	727	179	563	1916	1745	2622	2069	2625	1837	2153	2210	2188	1953	2080	2118	2240	2133	2297	2243	2079	2066	2193	2127	]
T [	1684	1602	1637	1668	1634	1629	1605	1653	1846	1885	1665	1503	1561	1778	1596	1490	1467	1529	1711	1729	1907	2512	269	104	11	17	40	5944	455	182	1486	1512	1683	1856	1501	1756	1620	1524	1692	1851	1668	1660	1586	1760	1626	1658	1663	1608	1566	1563	]

Hypothetical CWM

A [	-0.00	-0.00	-0.00	-0.01	-0.01	0.00	0.03	0.04	-0.01	-0.02	-0.01	-0.03	0.03	0.00	0.00	-0.01	-0.00	]
C [	0.01	-0.00	-0.00	0.00	0.01	0.02	-0.02	-0.01	-0.01	-0.02	-0.01	0.04	-0.01	0.01	0.01	0.01	0.00	]
G [	0.01	0.01	0.01	0.01	-0.00	0.01	0.01	0.00	0.04	0.04	0.00	-0.01	0.01	0.00	0.00	0.01	0.00	]
T [	-0.01	-0.01	-0.00	0.00	0.01	-0.01	-0.02	-0.03	-0.02	0.00	0.03	0.00	-0.02	-0.00	-0.00	-0.00	-0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3843

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 412

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 374

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 270

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 190

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 101

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 42

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 41

CWM

PFM

HCWM

6 profiles found for the same TF (ESRRA) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000818.1	ESRRA	ENCSR000DYQ	GM12878	Homo sapiens	MA0592.4
BP000819.1	ESRRA	ENCSR000EEW	HepG2	Homo sapiens	MA0592.4
BP000820.1	ESRRA	ENCSR029OPK	WTC11	Homo sapiens	MA0592.4
BP000822.1	ESRRA	ENCSR473SUA	A549	Homo sapiens	MA0592.4
BP000823.1	ESRRA	ENCSR486IFJ	K562	Homo sapiens	MA0592.4
BP000824.1	ESRRA	ENCSR954WVZ	MCF-7	Homo sapiens	MA0592.4