Detailed information of deep learning profile BP000823.1

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This page shows detailed deep learning-derived predictions and motifs for ESRRA in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ESRRA
Model ID: BP000823.1
Cell line/tissue: K562
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
JASPAR ID: MA0592.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P11474  
Source: ENCSR486IFJ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.00 0.03 0.05 -0.00 0.00 0.00 0.00 0.04 0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.01 -0.00 0.00 0.00 -0.00 -0.00 0.04 -0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 -0.00 0.00 0.00 -0.00 0.05 0.07 -0.00 0.00 0.00 -0.00 0.00 0.00 0.00 ]
T [ 0.00 0.00 0.01 -0.00 -0.00 0.00 -0.00 0.00 0.04 0.00 -0.00 0.00 -0.00 0.00 0.00 ]

Frequency matrix

       
A [ 3931 4041 4232 4148 3701 4694 3867 3672 3686 4259 4747 4466 3618 3700 4187 4131 3236 3169 3614 2991 2586 1738 3188 10681 13915 107 3 893 9 13444 3096 4974 2646 4524 3762 3757 3252 3793 3758 3105 3863 4520 3816 3705 3367 3375 3443 3884 4009 4007 ]
C [ 3797 3158 3151 2993 2928 2828 2941 2893 3354 3048 3183 3403 2754 2813 2788 2597 3957 4383 3009 3578 4995 4840 7438 161 29 20 1 24 12726 38 5721 3237 4078 2910 3002 4012 3365 3374 2854 4129 3925 3416 3081 3349 2909 3140 3615 3570 3197 3540 ]
G [ 3441 4186 4224 3560 4746 3899 4877 5087 3664 3588 3682 3429 4777 4316 4719 5019 4066 2928 3115 4631 3253 2293 2657 3306 386 14097 14343 582 681 752 2429 3287 3702 3745 5267 3683 3733 4223 4687 3295 3428 3510 4249 3823 4754 4525 3851 3952 4019 3600 ]
T [ 3185 2969 2747 3653 2979 2933 2669 2702 3650 3459 2742 3056 3205 3525 2660 2607 3095 3874 4616 3154 3520 5483 1071 206 24 130 7 12855 938 120 3108 2856 3928 3175 2323 2902 4004 2964 3055 3825 3138 2908 3208 3477 3324 3314 3445 2948 3129 3207 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.01 -0.00 0.03 0.05 -0.02 -0.03 -0.00 -0.05 0.04 0.00 0.00 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 0.02 -0.03 -0.01 -0.01 -0.02 -0.04 0.04 -0.03 0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.00 0.01 0.02 -0.00 0.05 0.07 -0.00 -0.00 0.01 -0.00 0.00 0.01 0.00 ]
T [ 0.00 0.00 0.02 -0.01 -0.01 -0.04 -0.01 -0.03 0.04 0.00 -0.02 0.00 -0.00 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 4438

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 4138

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2457

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1609

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 618

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 159

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 121

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 112

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 109

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 100

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 43

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 21

CWM

PFM

     

HCWM

6 profiles found for the same TF (ESRRA) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000818.1 ESRRA ENCSR000DYQ GM12878 Homo sapiens MA0592.4
BP000819.1 ESRRA ENCSR000EEW HepG2 Homo sapiens MA0592.4
BP000820.1 ESRRA ENCSR029OPK WTC11 Homo sapiens MA0592.4
BP000821.1 ESRRA ENCSR267NVP HepG2 Homo sapiens MA0592.4
BP000822.1 ESRRA ENCSR473SUA A549 Homo sapiens MA0592.4
BP000824.1 ESRRA ENCSR954WVZ MCF-7 Homo sapiens MA0592.4
Showing 6 profiles of page 1 from 1 pages
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