JASPAR - ESRRA - BP000824.1

This page shows detailed deep learning-derived predictions and motifs for ESRRA in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ESRRA
Model ID:	BP000824.1
Cell line/tissue:	MCF-7
Class:	Nuclear receptors with C4 zinc fingers
Family:	Steroid hormone receptors (NR3)
JASPAR ID:	MA0592.4
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P11474
Source:	ENCSR954WVZ
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 7855

Contribution weight matrix (CWM)

A [	-0.00	-0.00	-0.00	-0.00	0.01	0.03	-0.00	-0.00	-0.00	-0.00	0.03	0.00	-0.00	-0.00	-0.00	]
C [	0.00	0.00	0.00	0.01	-0.00	0.00	0.00	0.00	-0.00	0.02	-0.00	0.00	0.00	0.00	0.00	]
G [	0.00	0.00	0.00	-0.00	0.00	0.00	0.03	0.04	0.00	0.00	0.00	-0.00	0.00	0.00	0.00	]
T [	-0.00	0.00	0.00	-0.00	-0.00	-0.00	-0.00	-0.00	0.02	0.00	-0.00	0.00	-0.00	0.00	0.00	]

Frequency matrix

A [	1933	2216	1977	1891	1894	1944	2183	2303	2021	1915	1884	2144	1898	1735	1887	1698	1270	973	1626	5179	7206	117	3	452	9	7191	1404	2441	1358	1931	1825	2371	1627	2043	1687	1871	2076	2078	1900	1923	1874	1856	1874	2090	1989	2031	1893	1852	1921	1958	]
C [	1929	1812	1955	1963	1883	1883	1992	1875	1738	1854	1962	1815	2129	2144	1925	1854	2709	2802	3870	631	34	13	3	56	6912	25	3122	2027	2257	1809	1636	2034	2646	2345	1985	2018	1922	2013	1985	1907	1894	1963	2085	1931	1875	2020	1992	2153	2078	1964	]
G [	2287	2137	2250	2353	2128	2088	2015	2026	2400	2208	2367	2143	2046	1933	1960	2580	1926	1329	1491	1549	607	7549	7835	1014	513	593	1757	1922	2281	1788	3172	1823	1927	2060	2202	2027	2184	1999	2258	2198	2299	2276	2143	2158	2327	2121	2159	2018	2122	2189	]
T [	1706	1690	1673	1648	1950	1940	1665	1651	1696	1878	1642	1753	1782	2043	2083	1723	1950	2751	868	496	8	176	14	6333	421	46	1572	1465	1959	2327	1222	1627	1655	1407	1981	1939	1673	1765	1712	1827	1788	1760	1753	1676	1664	1683	1811	1832	1734	1744	]

Hypothetical CWM

A [	-0.00	-0.01	-0.01	-0.00	0.01	0.03	-0.01	-0.02	-0.01	-0.03	0.03	0.00	-0.00	-0.01	-0.01	]
C [	0.00	0.00	0.00	0.01	-0.01	-0.00	-0.01	-0.02	-0.02	0.03	-0.03	0.01	0.01	0.00	0.00	]
G [	0.00	0.00	-0.00	0.00	0.00	0.00	0.03	0.04	0.00	-0.00	0.01	-0.01	0.00	0.00	-0.00	]
T [	-0.00	0.00	0.01	-0.01	-0.01	-0.04	-0.01	-0.01	0.02	0.00	-0.03	-0.00	-0.00	0.00	0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1667

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1053

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 953

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 97

CWM

PFM

HCWM

6 profiles found for the same TF (ESRRA) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000818.1	ESRRA	ENCSR000DYQ	GM12878	Homo sapiens	MA0592.4
BP000819.1	ESRRA	ENCSR000EEW	HepG2	Homo sapiens	MA0592.4
BP000820.1	ESRRA	ENCSR029OPK	WTC11	Homo sapiens	MA0592.4
BP000821.1	ESRRA	ENCSR267NVP	HepG2	Homo sapiens	MA0592.4
BP000822.1	ESRRA	ENCSR473SUA	A549	Homo sapiens	MA0592.4
BP000823.1	ESRRA	ENCSR486IFJ	K562	Homo sapiens	MA0592.4