JASPAR - ESRRA - BP000820.1

This page shows detailed deep learning-derived predictions and motifs for ESRRA in WTC11 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ESRRA
Model ID:	BP000820.1
Cell line/tissue:	WTC11
Class:	Nuclear receptors with C4 zinc fingers
Family:	Steroid hormone receptors (NR3)
JASPAR ID:	MA0592.4
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P11474
Source:	ENCSR029OPK
Model:	BPNet
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Sequence logo

Motif name: counts.pos_patterns.pattern_1

Number of seqlets: 986

Contribution weight matrix (CWM)

A [	0.00	0.00	0.00	-0.00	-0.00	0.03	0.00	-0.00	-0.00	-0.00	-0.00	0.00	-0.00	-0.00	0.00	]
C [	0.00	0.00	-0.00	0.00	0.00	0.00	0.04	0.03	-0.00	0.00	0.00	0.00	0.00	0.00	0.00	]
G [	0.00	0.00	0.00	-0.00	0.03	-0.00	-0.00	0.00	0.00	-0.00	0.02	0.00	0.00	0.00	0.00	]
T [	-0.00	-0.00	-0.00	0.02	-0.00	-0.00	0.00	-0.00	0.03	0.03	-0.00	-0.00	-0.00	0.00	-0.00	]

Frequency matrix

A [	182	202	171	194	185	193	179	162	194	177	251	187	144	202	160	131	213	206	167	206	2	18	907	0	4	1	4	11	438	219	205	302	250	194	164	224	232	154	176	181	224	232	131	169	164	169	208	160	207	196	]
C [	312	321	292	278	320	347	300	331	318	266	241	293	334	272	257	446	287	282	227	130	83	28	46	984	968	4	35	146	102	242	402	222	222	301	341	305	305	371	288	269	302	313	370	340	300	357	319	345	261	268	]
G [	264	242	272	315	277	244	268	252	228	277	318	248	261	278	312	238	216	331	281	490	3	936	1	2	6	1	2	778	391	433	219	213	328	309	254	233	219	240	236	291	268	243	253	238	249	246	229	257	278	306	]
T [	228	221	251	199	204	202	239	241	246	266	176	258	247	234	257	171	270	167	311	160	898	4	32	0	8	980	945	51	55	92	160	249	186	182	227	224	230	221	286	245	192	198	232	239	273	214	230	224	240	216	]

Hypothetical CWM

A [	0.00	0.00	0.00	0.00	-0.02	-0.00	0.03	-0.02	-0.02	-0.01	-0.01	-0.02	0.01	0.00	-0.00	0.00	-0.00	]
C [	0.00	0.00	0.00	-0.01	0.01	-0.01	0.00	0.04	0.03	-0.01	0.01	0.01	-0.00	0.00	0.00	0.00	0.00	]
G [	0.00	0.00	0.00	0.01	-0.01	0.03	-0.02	-0.01	0.00	-0.00	-0.02	0.02	0.01	0.01	0.00	0.00	0.01	]
T [	-0.00	-0.00	-0.00	-0.00	0.02	-0.02	-0.01	-0.01	-0.02	0.03	0.03	-0.00	-0.01	-0.01	-0.00	-0.00	-0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 1413

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 423

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 422

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 324

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 101

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 28

CWM

PFM

HCWM

6 profiles found for the same TF (ESRRA) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000818.1	ESRRA	ENCSR000DYQ	GM12878	Homo sapiens	MA0592.4
BP000819.1	ESRRA	ENCSR000EEW	HepG2	Homo sapiens	MA0592.4
BP000821.1	ESRRA	ENCSR267NVP	HepG2	Homo sapiens	MA0592.4
BP000822.1	ESRRA	ENCSR473SUA	A549	Homo sapiens	MA0592.4
BP000823.1	ESRRA	ENCSR486IFJ	K562	Homo sapiens	MA0592.4
BP000824.1	ESRRA	ENCSR954WVZ	MCF-7	Homo sapiens	MA0592.4