Detailed information of deep learning profile BP000723.1

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This page shows detailed deep learning-derived predictions and motifs for USF2 in WTC11 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: USF2
Model ID: BP000723.1
Cell line/tissue: WTC11
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0526.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q15853  
Source: ENCSR229QAN
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.01 -0.00 -0.00 0.12 -0.00 0.00 -0.00 0.00 0.05 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 0.00 0.18 -0.00 0.06 0.00 0.00 0.00 -0.00 0.05 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.01 0.03 -0.00 -0.00 0.00 0.00 0.13 -0.00 0.18 0.00 -0.00 0.00 0.00 0.01 0.00 ]
T [ -0.00 -0.00 -0.00 0.02 -0.00 -0.00 0.01 0.00 0.13 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 2899 3153 2926 3055 2865 3006 2706 2537 2617 3100 2639 2546 2680 3045 2604 2455 2788 3659 3038 2957 2622 2769 2715 2905 3530 1325 29 13539 26 160 29 0 9902 444 1782 3170 3240 2898 2552 2319 2454 2921 3348 2699 2375 3290 4448 3802 2716 3053 ]
C [ 4660 4355 4260 4475 4636 4286 4522 4630 4299 4007 3849 3626 3928 3818 4148 4644 4402 3919 3629 4152 4174 3788 3272 2721 2197 4777 14122 183 6339 404 21 6 1511 9248 6357 4461 4065 4165 4058 4761 4252 3685 3589 4654 5694 4855 3803 3511 3761 4071 ]
G [ 3652 3619 3980 3770 3570 3667 3660 3598 4017 3471 3433 4075 4433 4719 4307 3545 3493 3990 4910 4440 3683 4494 4246 6657 7537 2139 2 173 1618 13586 25 14144 2222 1199 2099 3109 4036 4269 3837 3514 3810 4421 4763 4243 3273 3381 3381 3518 3938 4297 ]
T [ 2943 3027 2988 2854 3083 3195 3266 3389 3221 3576 4233 3907 3113 2572 3095 3510 3471 2586 2577 2605 3675 3103 3921 1871 890 5913 1 259 6171 4 14079 4 519 3263 3916 3414 2813 2822 3707 3560 3638 3127 2454 2558 2812 2628 2522 3323 3739 2733 ]

Hypothetical CWM

   
A [ 0.00 -0.01 -0.00 -0.01 0.03 -0.02 -0.02 0.12 -0.13 0.03 -0.05 -0.09 0.07 -0.05 -0.01 0.00 0.00 0.00 ]
C [ 0.02 0.02 0.02 0.03 0.00 0.02 0.18 -0.04 0.14 0.00 -0.01 -0.08 0.00 0.07 0.03 0.02 0.02 0.02 ]
G [ 0.02 0.02 0.03 0.03 0.06 0.01 -0.08 -0.00 -0.02 0.13 -0.04 0.18 0.02 -0.01 0.02 0.02 0.03 0.02 ]
T [ 0.00 0.00 -0.00 -0.00 -0.04 0.05 -0.09 -0.04 0.03 -0.12 0.13 -0.03 -0.03 0.04 -0.00 -0.00 -0.01 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 779

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 103

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 103

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 37

CWM

PFM

     

HCWM

11 profiles found for the same TF (USF2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000717.1 USF2 ENCSR000DZU GM12878 Homo sapiens MA0526.5
BP000718.1 USF2 ENCSR000ECD H1 Homo sapiens MA0526.5
BP000719.1 USF2 ENCSR000ECW HeLa-S3 Homo sapiens MA0526.5
BP000720.1 USF2 ENCSR000EEF HepG2 Homo sapiens MA0526.5
BP000721.1 USF2 ENCSR000EHG K562 Homo sapiens MA0526.5
BP000722.1 USF2 ENCSR145QNL HepG2 Homo sapiens MA0526.5
BP000724.1 USF2 ENCSR359NFW K562 Homo sapiens MA0526.5
BP000725.1 USF2 ENCSR513UQG IMR-90 Homo sapiens MA0526.5
BP000726.1 USF2 ENCSR563FBT A549 Homo sapiens MA0526.5
BP000727.1 USF2 ENCSR578KEN K562 Homo sapiens MA0526.5
Showing 10 profiles of page 1 from 2 pages