Detailed information of deep learning profile BP000723.1

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This page shows detailed deep learning-derived predictions and motifs for USF2 in WTC11 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: USF2
Model ID: BP000723.1
Cell line/tissue: WTC11
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0526.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q15853  
Source: ENCSR229QAN
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.13 0.00 0.01 -0.00 -0.00 0.02 -0.00 -0.00 -0.00 ]
C [ 0.00 0.01 0.00 0.00 -0.00 0.00 0.18 -0.00 0.13 0.00 0.00 -0.00 -0.00 0.03 0.01 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.05 -0.00 0.00 0.00 0.00 0.06 -0.00 0.18 0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 0.05 0.00 -0.00 0.00 -0.00 0.12 -0.00 -0.00 0.01 -0.00 -0.00 ]

Frequency matrix

       
A [ 2733 3739 3323 2522 2628 2812 2558 2454 3127 3638 3560 3707 2822 2813 3414 3916 3263 519 4 14079 4 6171 259 1 5913 890 1871 3921 3103 3675 2605 2577 2586 3471 3510 3095 2572 3113 3907 4233 3576 3221 3389 3266 3195 3083 2854 2988 3027 2943 ]
C [ 4297 3938 3518 3381 3381 3273 4243 4763 4421 3810 3514 3837 4269 4036 3109 2099 1199 2222 14144 25 13586 1618 173 2 2139 7537 6657 4246 4494 3683 4440 4910 3990 3493 3545 4307 4719 4433 4075 3433 3471 4017 3598 3660 3667 3570 3770 3980 3619 3652 ]
G [ 4071 3761 3511 3803 4855 5694 4654 3589 3685 4252 4761 4058 4165 4065 4461 6357 9248 1511 6 21 404 6339 183 14122 4777 2197 2721 3272 3788 4174 4152 3629 3919 4402 4644 4148 3818 3928 3626 3849 4007 4299 4630 4522 4286 4636 4475 4260 4355 4660 ]
T [ 3053 2716 3802 4448 3290 2375 2699 3348 2921 2454 2319 2552 2898 3240 3170 1782 444 9902 0 29 160 26 13539 29 1325 3530 2905 2715 2769 2622 2957 3038 3659 2788 2455 2604 3045 2680 2546 2639 3100 2617 2537 2706 3006 2865 3055 2926 3153 2899 ]

Hypothetical CWM

   
A [ 0.00 -0.01 -0.00 -0.00 0.04 -0.03 -0.03 0.13 -0.12 0.03 -0.04 -0.09 0.05 -0.04 -0.00 -0.00 0.00 0.00 ]
C [ 0.02 0.03 0.02 0.02 -0.01 0.02 0.18 -0.04 0.13 -0.02 -0.00 -0.08 0.01 0.06 0.03 0.03 0.02 0.02 ]
G [ 0.02 0.02 0.02 0.03 0.07 0.00 -0.08 -0.01 0.00 0.14 -0.04 0.18 0.02 0.00 0.03 0.02 0.02 0.02 ]
T [ 0.00 0.00 0.00 -0.01 -0.05 0.07 -0.09 -0.05 0.03 -0.13 0.12 -0.02 -0.02 0.03 -0.01 -0.00 -0.01 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 779

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 103

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 103

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 37

CWM

PFM

     

HCWM

11 profiles found for the same TF (USF2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000717.1 USF2 ENCSR000DZU GM12878 Homo sapiens MA0526.5
BP000718.1 USF2 ENCSR000ECD H1 Homo sapiens MA0526.5
BP000719.1 USF2 ENCSR000ECW HeLa-S3 Homo sapiens MA0526.5
BP000720.1 USF2 ENCSR000EEF HepG2 Homo sapiens MA0526.5
BP000721.1 USF2 ENCSR000EHG K562 Homo sapiens MA0526.5
BP000722.1 USF2 ENCSR145QNL HepG2 Homo sapiens MA0526.5
BP000724.1 USF2 ENCSR359NFW K562 Homo sapiens MA0526.5
BP000725.1 USF2 ENCSR513UQG IMR-90 Homo sapiens MA0526.5
BP000726.1 USF2 ENCSR563FBT A549 Homo sapiens MA0526.5
BP000727.1 USF2 ENCSR578KEN K562 Homo sapiens MA0526.5
Showing 10 profiles of page 1 from 2 pages