Detailed information of deep learning profile BP000711.1

This page shows detailed deep learning-derived predictions and motifs for ATF2 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ATF2
Model ID: BP000711.1
Cell line/tissue: K562
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
JASPAR ID: MA1632.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P15336  
Source: ENCSR014ARU
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ 0.00 -0.00 0.00 0.01 -0.00 -0.00 0.04 -0.00 -0.00 0.00 0.00 0.04 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 0.03 -0.00 0.00 0.03 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.00 0.00 0.03 0.00 -0.00 0.02 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.04 0.00 -0.00 -0.00 -0.00 0.04 -0.00 -0.00 0.01 0.00 -0.00 0.00 ]

Frequency matrix

A [ 235 224 239 250 239 228 224 251 232 213 222 185 245 257 242 235 228 158 630 10 4 1088 3 276 0 77 1082 27 161 190 231 181 224 221 228 228 203 260 219 213 213 206 239 217 213 253 228 206 218 262 ]
C [ 333 358 338 323 331 325 379 342 328 364 342 392 331 330 303 292 405 176 154 16 11 0 1062 144 22 1018 7 488 440 384 398 426 339 349 340 330 361 342 379 332 377 365 332 334 333 319 340 361 295 352 ]
G [ 285 343 315 310 336 356 314 313 360 322 338 333 348 311 374 399 271 687 315 3 1003 18 30 677 2 15 18 156 225 320 274 279 338 309 354 333 343 311 284 360 321 308 339 300 347 334 327 305 362 318 ]
T [ 263 191 224 233 210 207 199 210 196 217 214 206 192 218 197 190 212 95 17 1087 98 10 21 19 1092 6 9 445 290 222 213 230 215 237 194 225 209 203 234 211 205 237 206 265 223 210 221 244 241 184 ]

Hypothetical CWM

A [ 0.00 0.00 0.00 -0.01 0.00 0.02 -0.01 -0.02 0.04 -0.03 -0.00 -0.02 0.01 0.04 -0.02 -0.01 -0.00 -0.01 -0.00 -0.00 ]
C [ -0.00 0.00 0.00 0.00 -0.01 -0.01 -0.00 -0.03 -0.02 0.03 -0.01 -0.01 0.03 -0.03 0.01 0.01 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.01 0.01 -0.02 0.03 -0.01 -0.01 0.03 -0.02 -0.03 -0.00 -0.01 -0.01 0.00 0.00 0.00 -0.00 ]
T [ -0.00 -0.00 -0.01 -0.00 -0.01 -0.02 0.04 0.01 -0.02 -0.00 -0.03 0.04 -0.02 -0.01 0.02 0.00 -0.00 0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 57

7 profiles found for the same TF (ATF2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000709.1 ATF2 ENCSR000BQK GM12878 Homo sapiens MA1632.2
BP000710.1 ATF2 ENCSR000BQU H1 Homo sapiens MA1632.2
BP000712.1 ATF2 ENCSR047BUZ HepG2 Homo sapiens MA1632.2
BP000713.1 ATF2 ENCSR217HTK HEK293 Homo sapiens MA1632.2
BP000714.1 ATF2 ENCSR869IUD K562 Homo sapiens MA1632.2
BP000715.1 ATF2 ENCSR908HWZ HepG2 Homo sapiens MA1632.2
BP000716.1 ATF2 ENCSR961PPA GM12878 Homo sapiens MA1632.2
Showing 7 profiles of page 1 from 1 pages
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