JASPAR - ATF2 - BP000713.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for ATF2 in HEK293 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ATF2
Model ID:	BP000713.1
Cell line/tissue:	HEK293
Class:	Basic leucine zipper factors (bZIP)
Family:	Jun-related
JASPAR ID:	MA1632.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P15336
Source:	ENCSR217HTK
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 24555

Contribution weight matrix (CWM)

A [	0.00	0.00	-0.00	0.00	0.05	-0.00	-0.00	0.09	-0.00	0.01	-0.00	0.00	0.08	-0.00	-0.00	0.00	0.00	-0.00	]
C [	-0.00	-0.00	0.00	-0.00	-0.00	0.00	-0.00	0.00	0.10	-0.00	0.00	0.08	-0.00	0.00	0.01	0.00	0.00	-0.00	]
G [	-0.00	0.00	0.00	0.01	0.00	0.00	0.07	0.00	0.00	0.02	-0.00	-0.00	0.00	-0.00	-0.00	0.00	-0.00	-0.00	]
T [	0.00	-0.00	0.00	-0.00	-0.00	0.09	0.01	0.00	0.00	-0.00	0.09	-0.00	-0.00	0.04	0.00	-0.00	0.00	0.00	]

Frequency matrix

A [	7042	7347	7364	7377	7216	7074	7495	7113	6989	6918	7101	7270	7237	8408	8246	8951	8409	7011	7421	18876	109	144	24225	45	14527	396	2910	22746	718	4293	7025	6691	7243	7467	7240	6785	7157	7399	7671	7111	7219	7426	7330	7363	7038	7114	7196	7048	7431	7721	]
C [	5264	5095	4993	5254	5120	5388	4931	5447	5504	5412	5146	5438	5305	4294	4798	4342	4340	4744	4017	1081	159	193	9	23597	4274	478	20768	314	5622	8735	5373	5270	4963	4471	5271	5298	5055	5164	5028	4855	5133	5343	5285	5187	5374	5286	4935	5316	5304	4982	]
G [	5043	5159	5383	5118	4877	5036	5115	5123	4916	5139	4834	4993	5022	4823	4368	4791	5041	5028	8546	4314	14	19379	177	579	5290	165	549	716	1796	3377	4666	4130	4157	4174	4001	4676	4998	4999	4928	5184	5102	4727	4919	4723	4905	4918	5137	5141	4978	4924	]
T [	7206	6954	6815	6806	7342	7057	7014	6872	7146	7086	7474	6854	6991	7030	7143	6471	6765	7772	4571	284	24273	4839	144	334	464	23516	328	779	16419	8150	7491	8464	8192	8443	8043	7796	7345	6993	6928	7405	7101	7059	7021	7282	7238	7237	7287	7050	6842	6928	]

Hypothetical CWM

A [	0.01	0.01	-0.00	0.01	0.06	-0.05	-0.06	0.10	-0.06	0.02	-0.02	0.03	0.08	-0.04	-0.00	0.01	0.00	0.00	]
C [	0.00	0.00	0.01	0.00	-0.01	0.02	-0.04	-0.06	0.10	-0.01	-0.03	0.08	-0.07	0.03	0.03	0.01	0.01	0.00	]
G [	0.00	0.01	0.01	0.03	0.03	-0.07	0.08	-0.02	0.00	0.12	-0.05	-0.04	0.02	-0.01	0.00	0.01	0.00	0.00	]
T [	0.00	0.00	0.01	0.00	-0.05	0.09	0.04	-0.01	0.02	-0.07	0.09	-0.05	-0.05	0.05	0.01	0.00	0.01	0.01	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1759

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1030

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 193

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 103

CWM

PFM

HCWM

7 profiles found for the same TF (ATF2) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000709.1	ATF2	ENCSR000BQK	GM12878	Homo sapiens	MA1632.2
BP000710.1	ATF2	ENCSR000BQU	H1	Homo sapiens	MA1632.2
BP000711.1	ATF2	ENCSR014ARU	K562	Homo sapiens	MA1632.2
BP000712.1	ATF2	ENCSR047BUZ	HepG2	Homo sapiens	MA1632.2
BP000714.1	ATF2	ENCSR869IUD	K562	Homo sapiens	MA1632.2
BP000715.1	ATF2	ENCSR908HWZ	HepG2	Homo sapiens	MA1632.2
BP000716.1	ATF2	ENCSR961PPA	GM12878	Homo sapiens	MA1632.2