JASPAR - ATF2 - BP000714.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for ATF2 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ATF2
Model ID:	BP000714.1
Cell line/tissue:	K562
Class:	Basic leucine zipper factors (bZIP)
Family:	Jun-related
JASPAR ID:	MA1632.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P15336
Source:	ENCSR869IUD
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 25093

Contribution weight matrix (CWM)

A [	0.01	0.01	-0.00	0.00	0.08	-0.00	-0.00	0.14	0.00	0.02	-0.00	0.01	0.12	-0.00	-0.00	0.00	0.00	0.00	]
C [	-0.00	-0.00	0.00	-0.00	-0.00	0.00	-0.00	0.00	0.16	-0.01	0.00	0.11	-0.00	0.01	0.01	0.00	-0.00	-0.00	]
G [	-0.00	-0.00	0.00	0.01	0.00	-0.00	0.10	0.00	0.00	0.04	-0.00	-0.00	0.00	-0.00	-0.00	0.00	-0.00	-0.00	]
T [	0.00	0.00	0.00	-0.00	-0.00	0.13	0.01	0.00	0.00	-0.00	0.15	-0.00	-0.00	0.06	0.00	-0.00	0.00	0.01	]

Frequency matrix

A [	7670	7994	8068	7735	7686	7628	7822	7524	7361	7247	7562	7633	7738	9081	8709	9439	8988	7805	7906	19994	66	115	24775	18	15036	109	3818	23587	651	4437	7629	7188	8252	7937	7899	7038	7482	7708	8105	7587	7688	8337	7716	7922	7308	7351	7579	7467	7932	8349	]
C [	5005	4837	4730	4999	4897	5135	4643	5457	5400	5550	4965	5256	4933	3890	4648	4193	4207	4508	4336	810	139	232	7	24575	3978	218	20607	123	5390	8254	4776	4911	4523	4381	4862	5167	4899	4987	4700	4748	5033	5014	5074	5032	5270	5554	4994	5308	5248	4766	]
G [	4971	5087	5287	5132	4777	4850	5211	5046	4780	4974	4527	5048	4969	4517	4057	4655	4731	4888	8006	4121	14	19675	203	385	5799	48	453	655	1688	3452	4624	3868	3701	3848	3636	4486	4961	4850	4918	4903	4819	4434	4752	4603	4671	4660	4993	4908	4794	4666	]
T [	7447	7175	7008	7227	7733	7480	7417	7066	7552	7322	8039	7156	7453	7605	7679	6806	7167	7892	4845	168	24874	5071	108	115	280	24718	215	728	17364	8950	8064	9126	8617	8927	8696	8402	7751	7548	7370	7855	7553	7308	7551	7536	7844	7528	7527	7410	7119	7312	]

Hypothetical CWM

A [	0.02	0.02	0.00	0.01	0.09	-0.08	-0.08	0.14	-0.10	0.03	-0.04	0.05	0.12	-0.07	-0.00	0.01	0.00	0.00	]
C [	-0.01	-0.01	0.01	-0.01	-0.04	0.02	-0.07	-0.11	0.16	-0.03	-0.04	0.12	-0.11	0.04	0.04	0.01	0.00	-0.00	]
G [	-0.00	0.00	0.01	0.04	0.03	-0.11	0.12	-0.04	-0.01	0.18	-0.09	-0.07	0.02	-0.03	-0.01	0.01	-0.00	-0.01	]
T [	0.00	0.00	0.01	-0.00	-0.08	0.14	0.06	-0.03	0.03	-0.12	0.15	-0.07	-0.07	0.09	0.02	0.00	0.02	0.02	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1848

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1280

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 348

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 226

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 200

CWM

PFM

HCWM

7 profiles found for the same TF (ATF2) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000709.1	ATF2	ENCSR000BQK	GM12878	Homo sapiens	MA1632.2
BP000710.1	ATF2	ENCSR000BQU	H1	Homo sapiens	MA1632.2
BP000711.1	ATF2	ENCSR014ARU	K562	Homo sapiens	MA1632.2
BP000712.1	ATF2	ENCSR047BUZ	HepG2	Homo sapiens	MA1632.2
BP000713.1	ATF2	ENCSR217HTK	HEK293	Homo sapiens	MA1632.2
BP000715.1	ATF2	ENCSR908HWZ	HepG2	Homo sapiens	MA1632.2
BP000716.1	ATF2	ENCSR961PPA	GM12878	Homo sapiens	MA1632.2