JASPAR - ATF2 - BP000715.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for ATF2 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ATF2
Model ID:	BP000715.1
Cell line/tissue:	HepG2
Class:	Basic leucine zipper factors (bZIP)
Family:	Jun-related
JASPAR ID:	MA1632.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P15336
Source:	ENCSR908HWZ
Model:	BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_4

Number of seqlets: 1569

Contribution weight matrix (CWM)

A [	-0.00	-0.00	0.00	0.01	-0.00	-0.00	0.04	-0.00	-0.00	-0.00	0.00	0.05	-0.00	-0.00	-0.00	-0.00	]
C [	0.00	0.00	-0.00	0.00	-0.00	-0.00	0.00	0.02	0.00	0.00	0.03	0.00	0.00	0.01	0.00	0.00	]
G [	0.00	0.00	0.01	0.00	-0.00	0.03	0.00	-0.00	0.05	0.00	-0.00	0.00	-0.00	0.00	0.00	0.00	]
T [	-0.00	-0.00	-0.00	-0.00	0.04	0.00	-0.00	-0.00	0.00	0.05	-0.00	-0.00	0.01	0.00	-0.00	0.00	]

Frequency matrix

A [	322	330	367	379	323	350	358	335	321	356	320	387	309	307	302	289	347	354	369	376	361	350	695	20	6	1521	38	19	8	129	1566	45	167	254	264	320	302	326	322	314	344	357	316	327	331	346	327	341	312	325	]
C [	464	448	436	401	435	423	436	445	416	410	524	439	424	473	479	525	426	427	435	404	452	278	305	22	10	0	770	31	6	1426	0	566	751	414	530	463	400	407	421	469	401	474	473	429	476	458	427	433	451	405	]
G [	446	435	430	451	420	454	460	441	484	495	427	429	475	436	488	396	453	449	469	484	527	742	544	5	1412	22	347	1519	0	3	2	198	241	537	400	381	489	464	503	438	486	416	401	481	405	417	444	443	417	479	]
T [	337	356	336	338	391	342	315	348	348	308	298	314	361	353	300	359	343	339	296	305	229	199	25	1522	141	26	414	0	1555	11	1	760	410	364	375	405	378	372	323	348	338	322	379	332	357	348	371	352	389	360	]

Hypothetical CWM

A [	0.00	-0.00	-0.00	0.00	0.02	-0.02	-0.01	0.05	-0.02	0.01	0.00	0.05	0.05	-0.01	-0.00	-0.00	-0.01	-0.00	]
C [	0.01	0.01	0.01	0.01	0.01	0.00	-0.04	-0.03	0.05	0.00	0.02	0.03	-0.02	0.02	0.02	0.01	0.01	0.01	]
G [	0.00	0.01	0.01	0.02	0.02	-0.02	0.03	0.02	-0.00	0.05	-0.04	-0.04	0.00	0.01	0.00	0.01	0.01	0.01	]
T [	-0.00	-0.01	-0.00	-0.01	-0.02	0.05	0.04	0.00	0.00	-0.02	0.05	-0.02	-0.02	0.02	0.01	-0.00	0.00	0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 3990

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2846

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2199

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1727

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1122

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 828

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 535

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 328

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 301

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 83

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 67

CWM

PFM

HCWM

7 profiles found for the same TF (ATF2) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000709.1	ATF2	ENCSR000BQK	GM12878	Homo sapiens	MA1632.2
BP000710.1	ATF2	ENCSR000BQU	H1	Homo sapiens	MA1632.2
BP000711.1	ATF2	ENCSR014ARU	K562	Homo sapiens	MA1632.2
BP000712.1	ATF2	ENCSR047BUZ	HepG2	Homo sapiens	MA1632.2
BP000713.1	ATF2	ENCSR217HTK	HEK293	Homo sapiens	MA1632.2
BP000714.1	ATF2	ENCSR869IUD	K562	Homo sapiens	MA1632.2
BP000716.1	ATF2	ENCSR961PPA	GM12878	Homo sapiens	MA1632.2