JASPAR - ATF2 - BP000712.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for ATF2 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ATF2
Model ID:	BP000712.1
Cell line/tissue:	HepG2
Class:	Basic leucine zipper factors (bZIP)
Family:	Jun-related
JASPAR ID:	MA1632.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P15336
Source:	ENCSR047BUZ
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 16464

Contribution weight matrix (CWM)

A [	0.00	0.00	-0.00	0.00	0.07	-0.00	-0.00	0.15	-0.00	0.00	0.00	0.00	0.14	-0.00	-0.00	0.00	0.00	0.00	]
C [	-0.00	-0.00	-0.00	-0.00	-0.00	0.00	-0.00	-0.00	0.00	-0.00	-0.00	0.12	0.00	0.01	0.01	-0.00	-0.00	-0.00	]
G [	-0.00	-0.00	-0.00	0.01	0.01	-0.00	0.11	0.00	-0.01	0.15	-0.00	-0.00	0.00	-0.00	-0.00	0.00	-0.00	-0.00	]
T [	0.00	0.00	0.00	-0.00	-0.00	0.13	0.01	-0.00	0.02	-0.00	0.15	-0.00	-0.00	0.08	0.00	-0.00	0.00	0.01	]

Frequency matrix

A [	4567	4710	4651	4596	4681	4743	4827	5030	4916	5443	4964	4900	4652	5098	5396	4691	4842	5488	6103	5394	5672	5090	6082	6285	5511	12081	43	32	16400	214	176	34	12	16396	42	3428	5300	4480	4117	5054	5171	4956	4454	5536	4695	4752	4506	5022	4921	5235	]
C [	3036	3400	3493	2930	2904	2929	3178	3166	2842	2813	2817	2673	2802	3092	3357	3022	3101	3120	2709	2317	2515	2451	2303	2627	2529	389	236	33	3	16	338	11	16447	0	3785	4813	3213	2878	3189	2669	2760	2883	3071	2801	3288	3515	3621	3180	3043	3126	]
G [	3755	3104	3055	3399	2939	3212	3674	3499	3973	3621	3550	3671	3335	3044	2851	2922	3045	3071	3313	3931	2806	2937	3274	3087	5718	3916	8	13306	38	5884	15945	1	1	62	245	2730	2824	3700	3884	3852	2648	3814	3918	3516	4014	3634	3648	2854	3513	3433	]
T [	5106	5250	5265	5539	5940	5580	4785	4769	4733	4587	5133	5220	5675	5230	4860	5829	5476	4785	4339	4822	5471	5986	4805	4465	2706	78	16177	3093	23	10350	5	16418	4	6	12392	5493	5127	5406	5274	4889	5885	4811	5021	4611	4467	4563	4689	5408	4987	4670	]

Hypothetical CWM

A [	0.02	0.01	0.00	0.02	0.10	-0.06	-0.06	0.15	-0.11	0.03	-0.01	0.07	0.14	-0.08	-0.00	0.02	0.01	0.00	]
C [	-0.01	-0.01	0.01	0.00	-0.04	0.03	-0.05	-0.09	0.18	0.01	-0.05	0.12	-0.10	0.04	0.05	0.01	0.00	-0.00	]
G [	-0.00	0.00	0.01	0.04	0.05	-0.09	0.13	-0.04	-0.01	0.16	-0.10	-0.05	0.03	-0.05	-0.00	0.01	-0.01	-0.01	]
T [	0.01	0.01	0.01	-0.01	-0.08	0.13	0.05	-0.03	0.04	-0.09	0.15	-0.06	-0.08	0.11	0.01	0.00	0.02	0.02	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 6807

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 4960

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 464

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 389

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 139

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 127

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 65

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 63

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 42

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 37

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 26

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 23

CWM

PFM

HCWM

7 profiles found for the same TF (ATF2) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000709.1	ATF2	ENCSR000BQK	GM12878	Homo sapiens	MA1632.2
BP000710.1	ATF2	ENCSR000BQU	H1	Homo sapiens	MA1632.2
BP000711.1	ATF2	ENCSR014ARU	K562	Homo sapiens	MA1632.2
BP000713.1	ATF2	ENCSR217HTK	HEK293	Homo sapiens	MA1632.2
BP000714.1	ATF2	ENCSR869IUD	K562	Homo sapiens	MA1632.2
BP000715.1	ATF2	ENCSR908HWZ	HepG2	Homo sapiens	MA1632.2
BP000716.1	ATF2	ENCSR961PPA	GM12878	Homo sapiens	MA1632.2