Detailed information of deep learning profile BP000711.1

This page shows detailed deep learning-derived predictions and motifs for ATF2 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ATF2
Model ID: BP000711.1
Cell line/tissue: K562
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
JASPAR ID: MA1632.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P15336  
Source: ENCSR014ARU
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ 0.00 -0.00 0.00 0.01 -0.00 -0.00 0.04 -0.00 -0.00 -0.00 0.00 0.04 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 0.02 -0.00 0.00 0.03 0.00 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.03 0.00 -0.00 0.03 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.04 0.00 0.00 -0.00 -0.00 0.04 -0.00 -0.00 0.01 0.00 -0.00 0.00 ]

Frequency matrix

A [ 184 241 244 221 210 223 265 206 237 205 211 234 203 209 225 194 237 215 230 213 222 290 445 9 6 1092 19 21 10 98 1087 17 95 212 190 197 218 192 206 214 217 196 210 199 207 210 233 224 191 263 ]
C [ 318 362 305 327 334 347 300 339 308 321 360 284 311 343 333 354 309 338 279 274 320 225 156 18 15 2 677 30 18 1003 3 315 687 271 399 374 311 348 333 338 322 360 313 314 356 336 310 315 343 285 ]
G [ 352 295 361 340 319 333 334 332 365 377 332 379 342 361 330 340 349 339 426 398 384 440 488 7 1018 22 144 1062 0 11 16 154 176 405 292 303 330 331 392 342 364 328 342 379 325 331 323 338 358 333 ]
T [ 262 218 206 228 253 213 217 239 206 213 213 219 260 203 228 228 221 224 181 231 190 161 27 1082 77 0 276 3 1088 4 10 630 158 228 235 242 257 245 185 222 213 232 251 224 228 239 250 239 224 235 ]

Hypothetical CWM

A [ 0.00 0.00 0.00 -0.00 0.00 0.02 -0.01 -0.02 0.04 -0.03 -0.00 -0.02 0.01 0.04 -0.02 -0.01 -0.00 -0.01 -0.00 -0.00 ]
C [ -0.00 0.00 0.00 0.00 -0.01 -0.01 -0.00 -0.03 -0.02 0.03 -0.01 -0.01 0.03 -0.02 0.01 0.01 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.01 0.01 -0.03 0.03 -0.01 -0.01 0.03 -0.02 -0.03 -0.00 -0.01 -0.01 0.00 0.00 0.00 -0.00 ]
T [ -0.00 -0.00 -0.01 -0.00 -0.01 -0.02 0.04 0.01 -0.02 -0.00 -0.03 0.04 -0.02 -0.01 0.02 0.00 -0.01 0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 57

7 profiles found for the same TF (ATF2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000709.1 ATF2 ENCSR000BQK GM12878 Homo sapiens MA1632.2
BP000710.1 ATF2 ENCSR000BQU H1 Homo sapiens MA1632.2
BP000712.1 ATF2 ENCSR047BUZ HepG2 Homo sapiens MA1632.2
BP000713.1 ATF2 ENCSR217HTK HEK293 Homo sapiens MA1632.2
BP000714.1 ATF2 ENCSR869IUD K562 Homo sapiens MA1632.2
BP000715.1 ATF2 ENCSR908HWZ HepG2 Homo sapiens MA1632.2
BP000716.1 ATF2 ENCSR961PPA GM12878 Homo sapiens MA1632.2
Showing 7 profiles of page 1 from 1 pages
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