JASPAR - ATF2 - BP000710.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for ATF2 in H1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ATF2
Model ID:	BP000710.1
Cell line/tissue:	H1
Class:	Basic leucine zipper factors (bZIP)
Family:	Jun-related
JASPAR ID:	MA1632.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P15336
Source:	ENCSR000BQU
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 2342

Contribution weight matrix (CWM)

A [	0.00	0.00	-0.00	0.00	0.01	-0.00	-0.00	0.04	-0.00	-0.00	-0.00	0.00	0.03	-0.00	-0.00	-0.00	-0.00	-0.00	]
C [	-0.00	0.00	0.00	-0.00	-0.00	0.00	-0.00	-0.00	0.03	-0.00	0.00	0.02	-0.00	0.00	0.01	0.00	0.00	0.00	]
G [	0.00	0.00	0.00	0.01	0.00	-0.00	0.02	0.00	0.00	0.01	-0.00	-0.00	0.00	-0.00	-0.00	0.00	0.00	-0.00	]
T [	-0.00	-0.00	-0.00	-0.00	-0.00	0.04	0.01	-0.00	-0.00	-0.00	0.04	-0.00	-0.00	0.01	0.00	-0.00	0.00	0.00	]

Frequency matrix

A [	534	572	525	499	544	493	522	622	495	480	479	482	600	618	623	594	520	580	1337	30	29	2106	3	858	44	232	2232	77	255	471	465	480	523	488	508	488	566	583	486	479	519	493	523	532	532	525	493	496	546	562	]
C [	700	625	663	662	639	628	726	587	614	617	697	699	635	537	535	588	701	447	310	67	22	19	2242	477	69	2052	10	852	1155	696	750	695	607	740	640	687	647	639	634	696	692	702	669	648	647	662	680	702	664	630	]
G [	591	672	628	615	626	707	637	628	686	665	703	669	566	602	669	714	652	1031	618	5	1632	190	65	955	20	13	74	312	366	655	549	596	602	543	691	656	662	607	647	688	623	620	653	628	628	654	630	615	628	625	]
T [	517	473	526	566	533	514	457	505	547	580	463	492	541	585	515	446	469	284	77	2240	659	27	32	52	2209	45	26	1101	566	520	578	571	610	571	503	511	467	513	575	479	508	527	497	534	535	501	539	529	504	525	]

Hypothetical CWM

A [	0.01	0.00	-0.00	0.00	0.02	-0.01	-0.01	0.04	-0.03	0.00	-0.01	0.03	0.04	-0.02	-0.01	-0.00	-0.00	]
C [	0.00	0.01	0.01	0.00	-0.00	0.01	-0.03	-0.02	0.04	-0.00	-0.00	0.02	-0.03	0.01	0.02	0.01	0.00	]
G [	0.00	0.01	0.01	0.01	0.01	-0.03	0.02	0.00	-0.00	0.04	-0.02	-0.03	0.01	-0.00	0.00	0.01	0.01	]
T [	0.00	-0.00	-0.00	-0.01	-0.01	0.04	0.03	-0.01	0.00	-0.03	0.04	-0.01	-0.01	0.02	0.00	-0.00	0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1058

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 429

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 413

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 206

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 116

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 37

CWM

PFM

HCWM

7 profiles found for the same TF (ATF2) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000709.1	ATF2	ENCSR000BQK	GM12878	Homo sapiens	MA1632.2
BP000711.1	ATF2	ENCSR014ARU	K562	Homo sapiens	MA1632.2
BP000712.1	ATF2	ENCSR047BUZ	HepG2	Homo sapiens	MA1632.2
BP000713.1	ATF2	ENCSR217HTK	HEK293	Homo sapiens	MA1632.2
BP000714.1	ATF2	ENCSR869IUD	K562	Homo sapiens	MA1632.2
BP000715.1	ATF2	ENCSR908HWZ	HepG2	Homo sapiens	MA1632.2
BP000716.1	ATF2	ENCSR961PPA	GM12878	Homo sapiens	MA1632.2