JASPAR - ATF2 - BP000710.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for ATF2 in H1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ATF2
Model ID:	BP000710.1
Cell line/tissue:	H1
Class:	Basic leucine zipper factors (bZIP)
Family:	Jun-related
JASPAR ID:	MA1632.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P15336
Source:	ENCSR000BQU
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 2342

Contribution weight matrix (CWM)

A [	0.00	0.00	-0.00	0.00	0.01	-0.00	-0.00	0.04	-0.00	-0.00	-0.00	0.01	0.04	-0.00	-0.00	-0.00	-0.00	-0.00	]
C [	-0.00	0.00	0.00	-0.00	-0.00	0.00	-0.00	-0.00	0.01	0.00	0.00	0.02	-0.00	0.00	0.01	0.00	0.00	0.00	]
G [	0.00	0.00	0.00	0.01	0.00	-0.00	0.02	0.00	-0.00	0.03	-0.00	-0.00	0.00	-0.00	-0.00	0.00	0.00	-0.00	]
T [	-0.00	-0.00	-0.00	-0.00	-0.00	0.03	0.00	-0.00	-0.00	-0.00	0.04	-0.00	-0.00	0.01	0.00	-0.00	0.00	0.00	]

Frequency matrix

A [	525	504	529	539	501	535	534	497	527	508	479	575	513	467	511	503	571	610	571	578	520	566	1101	26	45	2209	52	32	27	659	2240	77	284	469	446	515	585	541	492	463	580	547	505	457	514	533	566	526	473	517	]
C [	625	628	615	630	654	628	628	653	620	623	688	647	607	662	656	691	543	602	596	549	655	366	312	74	13	20	955	65	190	1632	5	618	1031	652	714	669	602	566	669	703	665	686	628	637	707	626	615	628	672	591	]
G [	630	664	702	680	662	647	648	669	702	692	696	634	639	647	687	640	740	607	695	750	696	1155	852	10	2052	69	477	2242	19	22	67	310	447	701	588	535	537	635	699	697	617	614	587	726	628	639	662	663	625	700	]
T [	562	546	496	493	525	532	532	523	493	519	479	486	583	566	488	508	488	523	480	465	471	255	77	2232	232	44	858	3	2106	29	30	1337	580	520	594	623	618	600	482	479	480	495	622	522	493	544	499	525	572	534	]

Hypothetical CWM

A [	0.00	-0.00	0.00	0.02	-0.01	-0.01	0.04	-0.03	0.00	-0.01	0.03	0.04	-0.01	-0.01	-0.00	-0.00	0.00	]
C [	0.01	0.01	0.00	-0.00	0.01	-0.03	-0.02	0.04	-0.00	0.00	0.02	-0.03	0.01	0.01	0.01	0.01	0.00	]
G [	0.00	0.01	0.02	0.01	-0.03	0.02	-0.00	-0.00	0.04	-0.02	-0.03	0.01	-0.00	0.00	0.01	0.01	0.00	]
T [	-0.00	-0.00	-0.01	-0.02	0.04	0.03	-0.01	0.00	-0.03	0.04	-0.01	-0.01	0.02	0.00	-0.00	0.00	0.01	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1058

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 429

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 413

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 206

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 116

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 37

CWM

PFM

HCWM

7 profiles found for the same TF (ATF2) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000709.1	ATF2	ENCSR000BQK	GM12878	Homo sapiens	MA1632.2
BP000711.1	ATF2	ENCSR014ARU	K562	Homo sapiens	MA1632.2
BP000712.1	ATF2	ENCSR047BUZ	HepG2	Homo sapiens	MA1632.2
BP000713.1	ATF2	ENCSR217HTK	HEK293	Homo sapiens	MA1632.2
BP000714.1	ATF2	ENCSR869IUD	K562	Homo sapiens	MA1632.2
BP000715.1	ATF2	ENCSR908HWZ	HepG2	Homo sapiens	MA1632.2
BP000716.1	ATF2	ENCSR961PPA	GM12878	Homo sapiens	MA1632.2