JASPAR - JUND - BP000666.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for JUND in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	JUND
Model ID:	BP000666.1
Cell line/tissue:	GM12878
Class:	Basic leucine zipper factors (bZIP)
Family:	Jun-related
JASPAR ID:	MA1141.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P17535
Source:	ENCSR000DYS
Model:	BPNet
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Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 2493

Contribution weight matrix (CWM)

A [	-0.00	0.00	0.01	-0.00	-0.00	0.05	-0.00	-0.00	0.00	0.05	-0.00	0.00	-0.00	]
C [	0.00	-0.00	-0.00	0.00	0.00	-0.00	0.02	-0.00	0.04	0.00	0.00	0.00	0.01	]
G [	0.00	0.00	0.00	-0.00	0.04	-0.00	0.00	0.00	-0.00	0.00	-0.00	-0.00	0.00	]
T [	-0.00	0.00	-0.00	0.05	0.00	-0.00	-0.00	0.05	-0.00	-0.00	0.01	0.00	-0.00	]

Frequency matrix

A [	670	655	692	648	674	622	687	689	703	665	567	586	628	707	695	680	657	1161	5	2	2485	72	32	155	2484	323	850	676	483	601	672	594	820	742	648	597	597	645	644	624	620	650	629	615	640	652	616	650	625	618	]
C [	598	575	636	636	608	619	590	578	568	533	523	670	729	647	536	510	233	506	8	7	3	2249	1	2321	1	460	708	632	850	589	495	561	678	672	596	614	658	606	540	580	583	583	597	581	597	609	623	619	586	593	]
G [	582	609	524	575	561	599	598	634	580	605	680	622	499	587	714	625	901	633	4	2383	2	85	29	13	4	464	225	413	453	591	701	748	462	492	452	619	569	601	639	599	585	564	597	552	559	569	583	520	580	576	]
T [	643	654	641	634	650	653	618	592	642	690	723	615	637	552	548	678	702	193	2476	101	3	87	2431	4	4	1246	710	772	707	712	625	590	533	587	797	663	669	641	670	690	705	696	670	745	697	663	671	704	702	706	]

Hypothetical CWM

A [	-0.00	-0.00	0.01	0.02	-0.03	-0.03	0.05	-0.02	-0.02	0.01	0.05	-0.01	0.01	0.00	-0.01	-0.00	-0.00	]
C [	0.00	0.00	-0.01	0.00	0.00	-0.02	-0.02	0.02	-0.03	0.05	-0.03	-0.00	0.01	0.01	0.02	0.00	0.00	]
G [	0.02	0.01	0.01	0.00	-0.03	0.05	-0.03	0.03	-0.01	-0.02	0.00	-0.00	-0.02	0.00	0.00	0.01	0.01	]
T [	-0.01	0.00	0.00	-0.01	0.05	0.01	-0.02	-0.02	0.05	-0.03	-0.03	0.02	0.01	-0.00	-0.00	-0.00	-0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1618

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1456

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 837

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 774

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 306

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 281

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 133

CWM

PFM

HCWM

17 profiles found for the same TF (JUND) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000669.1	JUND	ENCSR000EEI	HepG2	Homo sapiens	MA1141.2
BP000670.1	JUND	ENCSR000EGN	K562	Homo sapiens	MA1141.2
BP000671.1	JUND	ENCSR000EIB	SK-N-SH	Homo sapiens	MA1141.2
BP000672.1	JUND	ENCSR000EYV	GM12878	Homo sapiens	MA0491.3
BP000673.1	JUND	ENCSR196HGZ	liver	Homo sapiens	MA1141.2
BP000674.1	JUND	ENCSR282ZLP	HepG2	Homo sapiens	MA1141.2
BP000675.1	JUND	ENCSR837GTK	liver	Homo sapiens	MA1141.2