Detailed information of deep learning profile BP000671.1

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This page shows detailed deep learning-derived predictions and motifs for JUND in SK-N-SH using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: JUND
Model ID: BP000671.1
Cell line/tissue: SK-N-SH
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
JASPAR ID: MA1141.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17535  
Source: ENCSR000EIB
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.03 -0.00 -0.00 0.11 -0.00 -0.00 0.00 0.09 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 0.04 -0.00 0.10 0.00 0.01 0.01 0.01 0.00 ]
G [ 0.00 0.00 0.01 0.01 0.00 0.12 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.10 0.00 -0.00 -0.00 0.09 -0.00 -0.00 0.03 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 5501 5653 5359 5603 5602 5841 5119 5295 5050 5222 5291 5910 5766 5780 4617 4847 10416 30 30 19118 627 416 2054 18568 977 4727 4770 4781 4485 4937 5487 6002 5785 5375 6099 5031 4718 5536 5243 5308 5926 5325 5331 5272 5334 5248 5184 5390 5834 5314 ]
C [ 4186 4033 4161 4123 4384 4026 3965 4465 4805 4523 3873 3841 4412 3691 4252 2660 2586 34 16 36 16423 72 16775 125 4441 6163 6324 5500 4323 4053 4012 3838 3842 4324 4524 4433 4661 4244 4118 4610 4002 4644 4036 4028 3940 4033 4059 4088 4046 3996 ]
G [ 4140 3971 4196 4176 4187 4479 4397 4190 3930 4171 4669 4634 4207 4837 4747 7063 5793 23 18562 26 238 144 237 317 3145 3467 3526 3338 3550 4493 3849 4580 4377 3732 3688 3702 4202 3795 4440 3914 4036 3852 3960 4050 4062 4643 4768 4511 3951 4628 ]
T [ 5400 5570 5511 5325 5054 4881 5746 5277 5442 5311 5394 4842 4842 4919 5611 4657 432 19140 619 47 1939 18595 161 217 10664 4870 4607 5608 6869 5744 5879 4807 5223 5796 4916 6061 5646 5652 5426 5395 5263 5406 5900 5877 5891 5303 5216 5238 5396 5289 ]

Hypothetical CWM

   
A [ 0.00 -0.00 -0.01 -0.00 0.05 -0.07 -0.06 0.11 -0.03 -0.04 0.03 0.09 -0.05 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.01 0.01 0.02 0.01 0.01 0.02 -0.06 -0.03 0.05 -0.06 0.11 -0.05 0.03 0.03 0.03 0.02 0.02 ]
G [ 0.02 0.02 0.03 0.04 0.03 -0.06 0.12 -0.04 0.05 -0.01 -0.06 0.02 0.00 0.01 0.02 0.01 0.01 ]
T [ -0.00 -0.00 0.00 -0.00 -0.05 0.10 0.02 -0.04 -0.02 0.09 -0.06 -0.07 0.04 -0.00 -0.01 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2606

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2239

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 878

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 403

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 177

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 78

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 45

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 44

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 36

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 34

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 21

CWM

PFM

     

HCWM

17 profiles found for the same TF (JUND) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000658.1 JUND ENCSR000BGK HepG2 Homo sapiens MA1141.2
BP000659.1 JUND ENCSR000BKP H1 Homo sapiens MA1141.2
BP000660.1 JUND ENCSR000BRF A549 Homo sapiens MA1141.2
BP000661.1 JUND ENCSR000BSA HCT116 Homo sapiens MA1141.2
BP000662.1 JUND ENCSR000BSK SK-N-SH Homo sapiens MA1141.2
BP000663.1 JUND ENCSR000BSU MCF-7 Homo sapiens MA1141.2
BP000664.1 JUND ENCSR000BVO T47D Homo sapiens MA1141.2
BP000665.1 JUND ENCSR000DJX K562 Homo sapiens MA1141.2
BP000666.1 JUND ENCSR000DYS GM12878 Homo sapiens MA1141.2
BP000667.1 JUND ENCSR000EBZ H1 Homo sapiens MA1141.2
Showing 10 profiles of page 1 from 2 pages