Detailed information of deep learning profile BP000667.1

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This page shows detailed deep learning-derived predictions and motifs for JUND in H1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: JUND
Model ID: BP000667.1
Cell line/tissue: H1
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
JASPAR ID: MA1141.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17535  
Source: ENCSR000EBZ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.02 -0.00 0.00 0.10 -0.00 -0.00 0.00 0.09 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.05 -0.00 0.09 0.00 0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.01 0.00 0.10 0.00 0.00 0.00 -0.00 0.00 0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.10 0.00 -0.00 -0.00 0.09 0.00 -0.00 0.02 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 1204 1258 1242 1239 1283 1242 1203 1119 1251 1227 1356 1084 1140 1067 1127 1166 1329 1292 1309 921 1175 2291 2 4 4951 37 44 152 4924 163 924 1012 993 988 1055 1193 1240 1322 1224 1376 1074 1036 1271 1098 1160 1314 1177 1172 1165 1188 ]
C [ 1354 1246 1265 1293 1250 1243 1245 1293 1269 1355 1172 1172 1338 1453 1307 1148 1185 1283 1002 1313 699 785 5 5 8 4680 7 4803 14 1590 2050 1978 1736 1384 1273 1321 1331 1287 1360 1398 1341 1443 1280 1307 1403 1252 1399 1221 1264 1241 ]
G [ 1192 1258 1333 1255 1240 1278 1221 1280 1253 1264 1343 1411 1275 1282 1381 1512 1353 1355 1652 1527 2233 1823 7 4916 4 16 15 2 25 971 882 1007 996 1036 1328 1079 1357 1298 1098 1079 1125 1237 1166 1363 1194 1243 1202 1241 1188 1206 ]
T [ 1218 1206 1128 1181 1195 1205 1299 1276 1195 1122 1097 1301 1215 1166 1153 1142 1101 1038 1005 1207 861 69 4954 43 5 235 4902 11 5 2244 1112 971 1243 1560 1312 1375 1040 1061 1286 1115 1428 1252 1251 1200 1211 1159 1190 1334 1351 1333 ]

Hypothetical CWM

   
A [ 0.00 0.00 -0.01 0.00 0.04 -0.06 -0.05 0.10 -0.03 -0.03 0.03 0.09 -0.05 -0.00 0.00 -0.00 -0.00 ]
C [ 0.02 0.02 0.02 0.00 0.01 0.02 -0.05 -0.02 0.05 -0.05 0.10 -0.04 0.03 0.04 0.03 0.02 0.02 ]
G [ 0.02 0.02 0.03 0.04 0.03 -0.05 0.10 -0.04 0.05 0.01 -0.05 0.01 0.01 0.01 0.02 0.02 0.02 ]
T [ -0.00 -0.00 0.00 -0.00 -0.05 0.10 0.02 -0.03 -0.02 0.09 -0.05 -0.06 0.04 0.00 -0.01 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3032

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2134

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 891

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 628

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 563

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 479

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 238

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 180

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 86

CWM

PFM

     

HCWM

17 profiles found for the same TF (JUND) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000658.1 JUND ENCSR000BGK HepG2 Homo sapiens MA1141.2
BP000659.1 JUND ENCSR000BKP H1 Homo sapiens MA1141.2
BP000660.1 JUND ENCSR000BRF A549 Homo sapiens MA1141.2
BP000661.1 JUND ENCSR000BSA HCT116 Homo sapiens MA1141.2
BP000662.1 JUND ENCSR000BSK SK-N-SH Homo sapiens MA1141.2
BP000663.1 JUND ENCSR000BSU MCF-7 Homo sapiens MA1141.2
BP000664.1 JUND ENCSR000BVO T47D Homo sapiens MA1141.2
BP000665.1 JUND ENCSR000DJX K562 Homo sapiens MA1141.2
BP000666.1 JUND ENCSR000DYS GM12878 Homo sapiens MA1141.2
BP000668.1 JUND ENCSR000EDH HeLa-S3 Homo sapiens MA1141.2
Showing 10 profiles of page 1 from 2 pages