Detailed information of deep learning profile BP000666.1

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This page shows detailed deep learning-derived predictions and motifs for JUND in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: JUND
Model ID: BP000666.1
Cell line/tissue: GM12878
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
JASPAR ID: MA1141.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17535  
Source: ENCSR000DYS
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 0.00 0.00 0.01 -0.00 -0.00 0.05 -0.00 -0.00 0.00 0.05 -0.00 0.00 0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 -0.00 0.04 -0.00 0.00 0.00 0.00 0.00 ]
G [ 0.01 0.00 0.00 0.00 0.00 0.04 -0.00 0.02 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 0.00 0.00 -0.00 0.05 0.00 -0.00 -0.00 0.05 -0.00 -0.00 0.01 0.00 0.00 -0.00 ]

Frequency matrix

       
A [ 706 702 704 671 663 697 745 670 696 705 690 670 641 669 663 797 587 533 590 625 712 707 772 710 1246 4 4 2431 87 3 101 2476 193 702 678 548 552 637 615 723 690 642 592 618 653 650 634 641 654 643 ]
C [ 576 580 520 583 569 559 552 597 564 585 599 639 601 569 619 452 492 462 748 701 591 453 413 225 464 4 13 29 85 2 2383 4 633 901 625 714 587 499 622 680 605 580 634 598 599 561 575 524 609 582 ]
G [ 593 586 619 623 609 597 581 597 583 583 580 540 606 658 614 596 672 678 561 495 589 850 632 708 460 1 2321 1 2249 3 7 8 506 233 510 536 647 729 670 523 533 568 578 590 619 608 636 636 575 598 ]
T [ 618 625 650 616 652 640 615 629 650 620 624 644 645 597 597 648 742 820 594 672 601 483 676 850 323 2484 155 32 72 2485 2 5 1161 657 680 695 707 628 586 567 665 703 689 687 622 674 648 692 655 670 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 -0.00 0.01 0.02 -0.03 -0.03 0.05 -0.02 -0.02 0.01 0.05 -0.01 0.00 0.00 -0.01 ]
C [ 0.01 0.01 0.00 0.00 -0.02 -0.00 0.00 -0.02 -0.01 0.03 -0.03 0.05 -0.03 0.00 0.01 0.01 0.02 ]
G [ 0.00 0.00 0.02 0.01 0.01 -0.00 -0.03 0.05 -0.03 0.02 -0.02 -0.02 0.00 0.00 -0.01 0.00 0.00 ]
T [ -0.00 -0.00 -0.01 0.00 0.01 -0.01 0.05 0.01 -0.02 -0.02 0.05 -0.03 -0.03 0.02 0.01 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1618

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1456

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 837

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 774

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 306

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 281

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 133

CWM

PFM

     

HCWM

17 profiles found for the same TF (JUND) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000658.1 JUND ENCSR000BGK HepG2 Homo sapiens MA1141.2
BP000659.1 JUND ENCSR000BKP H1 Homo sapiens MA1141.2
BP000660.1 JUND ENCSR000BRF A549 Homo sapiens MA1141.2
BP000661.1 JUND ENCSR000BSA HCT116 Homo sapiens MA1141.2
BP000662.1 JUND ENCSR000BSK SK-N-SH Homo sapiens MA1141.2
BP000663.1 JUND ENCSR000BSU MCF-7 Homo sapiens MA1141.2
BP000664.1 JUND ENCSR000BVO T47D Homo sapiens MA1141.2
BP000665.1 JUND ENCSR000DJX K562 Homo sapiens MA1141.2
BP000667.1 JUND ENCSR000EBZ H1 Homo sapiens MA1141.2
BP000668.1 JUND ENCSR000EDH HeLa-S3 Homo sapiens MA1141.2
Showing 10 profiles of page 1 from 2 pages