Detailed information of deep learning profile BP000673.1

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This page shows detailed deep learning-derived predictions and motifs for JUND in liver using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: JUND
Model ID: BP000673.1
Cell line/tissue: liver
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
JASPAR ID: MA1141.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17535  
Source: ENCSR196HGZ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 0.00 0.01 0.00 -0.00 0.07 -0.00 -0.00 0.00 0.07 0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 0.03 -0.00 0.06 -0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 0.07 -0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.00 0.07 0.00 -0.00 -0.00 0.05 -0.00 -0.00 0.01 0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 1213 1205 1232 1185 1290 1268 1216 1180 1181 1212 1248 1086 1099 1134 1148 1072 1329 1346 1435 987 1257 2233 0 2 4570 130 40 97 4568 130 978 953 1005 914 965 1118 1208 1416 1153 1251 1148 1087 1237 1201 1151 1304 1088 1205 1158 1116 ]
C [ 1084 1042 1012 1042 1073 1031 1088 1040 1162 1154 1019 989 1249 1233 1121 991 1083 1178 976 1275 668 580 1 0 1 4289 12 4476 1 1387 1470 1598 1364 1088 1042 1180 1272 1064 1163 1210 1179 1282 1074 1076 1296 1095 1245 1008 1055 1026 ]
G [ 1077 1060 1170 1173 1052 1088 1011 1108 1018 1056 1142 1197 1100 1016 1169 1397 1185 1041 1191 1137 1704 1669 1 4540 3 6 13 2 5 748 803 994 868 896 1236 975 1067 1008 934 952 989 1020 1055 1156 999 1032 1059 1008 998 1065 ]
T [ 1203 1270 1163 1177 1162 1190 1262 1249 1216 1155 1168 1305 1129 1194 1139 1117 980 1012 975 1178 948 95 4575 35 3 152 4512 2 3 2312 1326 1032 1340 1679 1334 1304 1030 1089 1327 1164 1261 1188 1211 1144 1131 1146 1185 1356 1366 1370 ]

Hypothetical CWM

   
A [ 0.01 0.00 -0.00 0.01 0.03 -0.04 -0.03 0.07 -0.01 -0.01 0.02 0.07 -0.02 -0.00 0.00 0.00 -0.00 ]
C [ 0.01 0.01 0.01 0.00 -0.00 -0.01 -0.04 -0.02 0.03 -0.02 0.06 -0.03 0.02 0.02 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.02 0.02 -0.03 0.07 -0.02 0.04 -0.01 -0.04 -0.01 0.00 0.00 0.01 0.01 0.01 ]
T [ -0.00 0.00 0.00 -0.00 -0.02 0.07 0.02 -0.02 -0.01 0.05 -0.03 -0.03 0.02 0.01 -0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3525

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2075

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1517

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1098

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 490

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 318

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 300

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 34

CWM

PFM

     

HCWM

17 profiles found for the same TF (JUND) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000658.1 JUND ENCSR000BGK HepG2 Homo sapiens MA1141.2
BP000659.1 JUND ENCSR000BKP H1 Homo sapiens MA1141.2
BP000660.1 JUND ENCSR000BRF A549 Homo sapiens MA1141.2
BP000661.1 JUND ENCSR000BSA HCT116 Homo sapiens MA1141.2
BP000662.1 JUND ENCSR000BSK SK-N-SH Homo sapiens MA1141.2
BP000663.1 JUND ENCSR000BSU MCF-7 Homo sapiens MA1141.2
BP000664.1 JUND ENCSR000BVO T47D Homo sapiens MA1141.2
BP000665.1 JUND ENCSR000DJX K562 Homo sapiens MA1141.2
BP000666.1 JUND ENCSR000DYS GM12878 Homo sapiens MA1141.2
BP000667.1 JUND ENCSR000EBZ H1 Homo sapiens MA1141.2
Showing 10 profiles of page 1 from 2 pages