Detailed information of deep learning profile BP000675.1

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This page shows detailed deep learning-derived predictions and motifs for JUND in liver using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: JUND
Model ID: BP000675.1
Cell line/tissue: liver
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
JASPAR ID: MA1141.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17535  
Source: ENCSR837GTK
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 0.00 0.01 -0.00 -0.00 0.07 -0.00 -0.00 0.00 0.07 0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 0.03 -0.00 0.06 -0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.00 -0.00 0.07 -0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.00 0.08 0.00 -0.00 -0.00 0.05 -0.00 -0.00 0.01 0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 1661 1601 1614 1608 1757 1635 1609 1539 1567 1608 1726 1484 1513 1522 1482 1386 1888 1897 1900 1320 1617 3007 1 1 6112 176 77 195 6082 192 1421 1274 1312 1212 1220 1462 1574 1938 1585 1755 1513 1491 1673 1596 1551 1816 1526 1619 1547 1596 ]
C [ 1463 1475 1409 1413 1425 1397 1429 1451 1490 1561 1364 1354 1655 1575 1448 1338 1404 1536 1332 1740 851 855 4 0 3 5690 31 5892 6 1771 1911 2058 1840 1427 1405 1733 1706 1303 1529 1526 1507 1651 1409 1421 1702 1422 1624 1342 1379 1385 ]
G [ 1372 1396 1504 1524 1377 1478 1425 1477 1399 1428 1495 1592 1408 1351 1704 1882 1550 1410 1579 1480 2288 2108 1 6047 1 15 27 8 19 1119 1015 1332 1116 1214 1569 1242 1441 1349 1269 1315 1413 1384 1440 1516 1358 1338 1431 1362 1391 1367 ]
T [ 1623 1647 1592 1574 1560 1609 1656 1652 1663 1522 1534 1689 1543 1671 1485 1513 1277 1276 1308 1579 1363 149 6113 71 3 238 5984 24 12 3037 1772 1455 1851 2266 1925 1682 1398 1529 1736 1523 1686 1593 1597 1586 1508 1543 1538 1796 1802 1771 ]

Hypothetical CWM

   
A [ 0.01 0.00 -0.00 0.01 0.02 -0.03 -0.02 0.07 -0.01 -0.00 0.03 0.07 -0.01 0.00 0.00 0.00 -0.00 ]
C [ 0.01 0.01 0.02 0.00 0.00 -0.00 -0.04 -0.01 0.03 -0.02 0.06 -0.03 0.02 0.02 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.02 0.02 -0.03 0.07 -0.01 0.05 0.00 -0.04 -0.00 0.01 0.01 0.02 0.01 0.01 ]
T [ -0.00 0.00 0.00 0.00 -0.01 0.08 0.03 -0.01 -0.01 0.05 -0.02 -0.03 0.02 0.01 -0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 7302

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 5470

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1766

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1481

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1255

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 833

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 35

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 34

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 27

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 23

CWM

PFM

     

HCWM

17 profiles found for the same TF (JUND) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000658.1 JUND ENCSR000BGK HepG2 Homo sapiens MA1141.2
BP000659.1 JUND ENCSR000BKP H1 Homo sapiens MA1141.2
BP000660.1 JUND ENCSR000BRF A549 Homo sapiens MA1141.2
BP000661.1 JUND ENCSR000BSA HCT116 Homo sapiens MA1141.2
BP000662.1 JUND ENCSR000BSK SK-N-SH Homo sapiens MA1141.2
BP000663.1 JUND ENCSR000BSU MCF-7 Homo sapiens MA1141.2
BP000664.1 JUND ENCSR000BVO T47D Homo sapiens MA1141.2
BP000665.1 JUND ENCSR000DJX K562 Homo sapiens MA1141.2
BP000666.1 JUND ENCSR000DYS GM12878 Homo sapiens MA1141.2
BP000667.1 JUND ENCSR000EBZ H1 Homo sapiens MA1141.2
Showing 10 profiles of page 1 from 2 pages