Detailed information of deep learning profile BP000672.1

  1. Home
  2. Deep Learning Profile > BP000672.1
This page shows detailed deep learning-derived predictions and motifs for JUND in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: JUND
Model ID: BP000672.1
Cell line/tissue: GM12878
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
JASPAR ID: MA0491.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17535  
Source: ENCSR000EYV
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.00 0.01 -0.00 -0.00 0.07 -0.00 -0.00 0.00 0.08 0.00 0.02 0.00 -0.00 0.00 0.01 0.01 0.03 0.00 -0.00 0.00 0.00 ]
C [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.01 -0.00 0.06 0.00 -0.00 -0.00 -0.00 0.02 -0.00 -0.00 -0.00 0.00 0.01 0.00 -0.00 0.00 ]
G [ 0.00 -0.00 0.00 -0.00 -0.00 0.03 -0.00 0.02 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.02 0.00 0.00 -0.00 0.00 -0.00 0.00 -0.00 ]
T [ -0.00 0.00 0.00 -0.00 0.04 0.00 0.00 -0.00 0.08 -0.00 0.00 0.03 0.01 0.01 0.01 -0.00 -0.00 0.00 -0.00 -0.00 0.01 0.00 -0.00 ]

Frequency matrix

       
A [ 1001 911 971 954 1015 978 963 937 925 941 906 936 997 1047 1001 918 835 1055 478 212 2833 124 40 383 3053 548 1466 878 457 759 1531 1358 2233 750 636 918 932 1038 1094 949 930 880 886 941 945 944 910 926 933 890 ]
C [ 560 661 617 621 574 615 561 605 555 530 608 601 667 646 618 564 402 870 265 408 34 1209 18 2577 2 92 333 525 1244 362 293 310 401 987 639 557 687 617 554 574 515 559 547 579 628 636 624 666 589 628 ]
G [ 630 577 585 580 611 651 617 646 620 633 697 679 582 615 598 631 1026 564 111 1736 45 1426 11 84 4 234 78 286 306 1280 759 870 169 812 314 711 630 611 601 696 590 623 691 614 616 569 564 566 586 607 ]
T [ 874 916 892 910 865 821 924 877 965 961 854 849 819 757 848 952 802 576 2211 709 153 306 2996 21 6 2191 1188 1376 1058 664 482 527 262 516 1476 879 816 799 816 846 1030 1003 941 931 876 916 967 907 957 940 ]

Hypothetical CWM

   
A [ 0.01 0.00 0.01 0.02 -0.02 -0.03 0.07 -0.03 -0.03 0.02 0.08 -0.00 0.03 0.01 -0.02 0.00 0.02 0.01 0.04 0.00 -0.01 0.00 0.01 ]
C [ 0.00 -0.00 -0.02 0.00 0.00 -0.02 -0.04 0.03 -0.05 0.07 -0.06 -0.04 -0.01 -0.00 0.04 -0.02 -0.01 -0.02 0.00 0.02 0.01 -0.00 0.01 ]
G [ 0.00 0.00 0.01 -0.01 -0.04 0.04 -0.05 0.04 -0.04 -0.03 -0.01 -0.02 -0.05 -0.02 -0.02 0.03 0.01 0.02 -0.03 0.01 -0.01 0.00 0.00 ]
T [ -0.00 0.01 0.00 -0.01 0.04 0.02 -0.02 -0.01 0.08 -0.05 -0.05 0.05 0.02 0.01 0.01 -0.01 -0.01 0.00 -0.02 -0.01 0.02 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 294

CWM

PFM

     

HCWM

17 profiles found for the same TF (JUND) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000658.1 JUND ENCSR000BGK HepG2 Homo sapiens MA1141.2
BP000659.1 JUND ENCSR000BKP H1 Homo sapiens MA1141.2
BP000660.1 JUND ENCSR000BRF A549 Homo sapiens MA1141.2
BP000661.1 JUND ENCSR000BSA HCT116 Homo sapiens MA1141.2
BP000662.1 JUND ENCSR000BSK SK-N-SH Homo sapiens MA1141.2
BP000663.1 JUND ENCSR000BSU MCF-7 Homo sapiens MA1141.2
BP000664.1 JUND ENCSR000BVO T47D Homo sapiens MA1141.2
BP000665.1 JUND ENCSR000DJX K562 Homo sapiens MA1141.2
BP000666.1 JUND ENCSR000DYS GM12878 Homo sapiens MA1141.2
BP000667.1 JUND ENCSR000EBZ H1 Homo sapiens MA1141.2
Showing 10 profiles of page 1 from 2 pages