Detailed information of deep learning profile BP000651.1

This page shows detailed deep learning-derived predictions and motifs for FOXA1 in HEK293T using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: FOXA1
Model ID: BP000651.1
Cell line/tissue: HEK293T
Class: Fork head/winged helix factors
Family: FOX
JASPAR ID: MA0148.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P55317  
Source: ENCSR094WHO
Model: BPNet
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Contribution weight matrix (CWM)

A [ 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 -0.00 0.01 0.01 0.01 0.00 0.01 0.00 0.00 0.00 0.00 ]
C [ -0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.01 -0.00 -0.00 -0.00 0.00 0.00 ]
G [ -0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 0.01 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 ]
T [ 0.00 -0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.01 0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 ]

Frequency matrix

A [ 219 204 216 216 245 227 230 214 248 203 236 237 228 234 205 240 246 250 250 228 146 183 114 253 427 377 96 9 622 676 707 11 682 249 277 220 214 226 226 200 239 200 177 210 221 227 226 209 224 237 ]
C [ 171 146 142 152 159 141 139 152 145 154 159 150 161 149 166 161 133 132 174 135 164 205 305 44 58 25 6 75 88 52 9 555 15 176 147 181 178 144 119 161 146 137 143 150 136 139 125 133 122 148 ]
G [ 133 149 154 155 137 142 137 142 138 147 138 148 160 131 147 116 128 145 150 130 247 211 108 18 211 56 585 8 12 5 6 9 12 182 161 214 142 143 158 153 159 164 187 158 149 110 127 152 155 146 ]
T [ 214 238 225 214 196 227 231 229 206 233 204 202 188 223 219 220 230 210 163 244 180 138 210 422 41 279 50 645 15 4 15 162 28 130 152 122 203 224 234 223 193 236 230 219 231 261 259 243 236 206 ]

Hypothetical CWM

A [ -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.01 0.01 0.01 0.01 -0.01 0.01 0.00 0.00 -0.00 -0.00 ]
C [ -0.00 -0.00 -0.00 0.00 -0.00 -0.01 -0.00 -0.01 -0.00 -0.01 -0.00 -0.01 0.01 -0.01 -0.00 -0.00 -0.00 -0.00 ]
G [ -0.00 0.00 -0.00 -0.00 -0.01 0.00 -0.01 0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.00 -0.00 -0.00 -0.00 ]
T [ 0.00 -0.00 -0.00 0.00 0.00 -0.01 0.00 0.00 0.01 -0.00 -0.01 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]

12 profiles found for the same TF (FOXA1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000645.1 FOXA1 ENCSR000BKW Ishikawa Homo sapiens MA0148.5
BP000646.1 FOXA1 ENCSR000BKY T47D Homo sapiens MA0148.5
BP000647.1 FOXA1 ENCSR000BLE HepG2 Homo sapiens MA0148.5
BP000648.1 FOXA1 ENCSR000BMO HepG2 Homo sapiens MA0148.5
BP000649.1 FOXA1 ENCSR000BPX A549 Homo sapiens MA0148.5
BP000650.1 FOXA1 ENCSR000BRD A549 Homo sapiens MA0148.5
BP000652.1 FOXA1 ENCSR126YEB MCF-7 Homo sapiens MA0148.5
BP000653.1 FOXA1 ENCSR267DFA HepG2 Homo sapiens MA0148.5
BP000654.1 FOXA1 ENCSR324RCI liver Homo sapiens MA0148.5
BP000655.1 FOXA1 ENCSR735KEY liver Homo sapiens MA0148.5
Showing 10 profiles of page 1 from 2 pages