Detailed information of deep learning profile BP000651.1

This page shows detailed deep learning-derived predictions and motifs for FOXA1 in HEK293T using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: FOXA1
Model ID: BP000651.1
Cell line/tissue: HEK293T
Class: Fork head/winged helix factors
Family: FOX
JASPAR ID: MA0148.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P55317  
Source: ENCSR094WHO
Model: BPNet
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Contribution weight matrix (CWM)

A [ 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 0.01 0.00 0.00 -0.00 0.00 0.00 0.00 -0.00 0.00 ]
C [ -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.01 -0.00 0.00 -0.00 0.00 0.00 0.00 -0.00 ]
G [ 0.00 0.00 -0.00 -0.00 -0.00 0.01 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 ]
T [ 0.00 0.00 0.00 0.00 0.01 0.00 0.01 0.01 0.01 -0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 ]

Frequency matrix

A [ 206 236 243 259 261 231 219 230 236 193 223 234 224 203 122 152 130 28 162 15 4 15 645 50 279 41 422 210 138 180 244 163 210 230 220 219 223 188 202 204 233 206 229 231 227 196 214 225 238 214 ]
C [ 146 155 152 127 110 149 158 187 164 159 153 158 143 142 214 161 182 12 9 6 5 12 8 585 56 211 18 108 211 247 130 150 145 128 116 147 131 160 148 138 147 138 142 137 142 137 155 154 149 133 ]
G [ 148 122 133 125 139 136 150 143 137 146 161 119 144 178 181 147 176 15 555 9 52 88 75 6 25 58 44 305 205 164 135 174 132 133 161 166 149 161 150 159 154 145 152 139 141 159 152 142 146 171 ]
T [ 237 224 209 226 227 221 210 177 200 239 200 226 226 214 220 277 249 682 11 707 676 622 9 96 377 427 253 114 183 146 228 250 250 246 240 205 234 228 237 236 203 248 214 230 227 245 216 216 204 219 ]

Hypothetical CWM

A [ -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.01 -0.00 0.01 0.00 0.00 -0.01 0.00 0.00 -0.00 -0.00 0.00 ]
C [ -0.00 -0.00 -0.00 -0.00 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 0.01 -0.01 0.00 -0.01 -0.00 -0.00 0.00 -0.00 ]
G [ -0.00 -0.00 -0.00 -0.00 -0.01 0.01 -0.01 -0.00 -0.01 -0.00 -0.01 -0.00 -0.01 -0.00 0.00 -0.00 -0.00 -0.00 ]
T [ -0.00 -0.00 0.00 0.00 0.01 -0.01 0.01 0.01 0.01 -0.01 -0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]

12 profiles found for the same TF (FOXA1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000645.1 FOXA1 ENCSR000BKW Ishikawa Homo sapiens MA0148.5
BP000646.1 FOXA1 ENCSR000BKY T47D Homo sapiens MA0148.5
BP000647.1 FOXA1 ENCSR000BLE HepG2 Homo sapiens MA0148.5
BP000648.1 FOXA1 ENCSR000BMO HepG2 Homo sapiens MA0148.5
BP000649.1 FOXA1 ENCSR000BPX A549 Homo sapiens MA0148.5
BP000650.1 FOXA1 ENCSR000BRD A549 Homo sapiens MA0148.5
BP000652.1 FOXA1 ENCSR126YEB MCF-7 Homo sapiens MA0148.5
BP000653.1 FOXA1 ENCSR267DFA HepG2 Homo sapiens MA0148.5
BP000654.1 FOXA1 ENCSR324RCI liver Homo sapiens MA0148.5
BP000655.1 FOXA1 ENCSR735KEY liver Homo sapiens MA0148.5
Showing 10 profiles of page 1 from 2 pages